| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28105 | 5:24,111,796-24,112,707 | - | C1H5g30015 | CX5g037651 | LOC_Os05g50160 | Os05g0577100 | - | Detail |
| C2H5g16560 | 5:24,119,207-24,123,823 | - | C1H5g15586 | CX5g040119 | LOC_Os05g50170 | Os05g0577200 | - | Detail |
| C2H5g18251 | 5:24,125,998-24,126,519 | - | C1H5g18973 | CX5g040982 | LOC_Os05g50180 | Os05g0577500 | - | Detail |
| C2H5g07752 | 5:24,128,176-24,141,377 | - | C1H5g14939 | CX5g037985 | LOC_Os05g50200 | Os05g0577800 | - | Detail |
| C2H5g09946 | 5:24,142,380-24,146,743 | - | C1H5g25502 | CX5g040371 | LOC_Os05g50210 | Os05g0577900 | - | Detail |
| C2H5g10460 | 5:24,147,354-24,149,591 | + | C1H5g03913 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C2H5g03748 | 5:24,153,325-24,154,242 | - | C1H5g20150 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C2H5g13618 | 5:24,162,476-24,167,600 | + | C1H5g22642 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g26536 | 5:24,167,680-24,168,015 | + | C1H5g05740 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g20774 | 5:24,169,397-24,170,344 | - | C1H5g30673 | CX5g039172 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g28332 | 5:24,174,131-24,177,534 | - | C1H5g30673 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g01414 | 5:24,178,489-24,179,683 | + | C1H5g18644 | CX5g038128 | - | - | - | Detail |
| C2H5g06442 | 5:24,180,855-24,181,193 | + | - | - | - | - | - | Detail |
| C2H5g24268 | 5:24,188,936-24,189,860 | + | C1H5g30824 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C2H5g28493 | 5:24,190,618-24,195,475 | - | C1H5g28939 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C2H5g09709 | 5:24,202,249-24,203,250 | + | C1H5g17437 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C2H5g24355 | 5:24,205,657-24,207,606 | + | C1H5g00625 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C2H5g30078 | 5:24,210,212-24,210,937 | + | C1H5g28773 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C2H5g20837 | 5:24,220,960-24,221,858 | - | C1H8g13275 | CX5g038520 | - | - | - | Detail |
| C2H5g16972 | 5:24,223,244-24,223,831 | - | C1H5g25217 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030915 | 3:33,553,003-33,553,569 | - | C1H3g19498 | C2H3g13096 | LOC_Os03g64260 | Os03g0860100 | OsERF83 | Detail |
| CX3g027910 | 3:33,559,446-33,576,186 | - | C1H3g08606 | C2H3g04480 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| CX3g029996 | 3:33,579,728-33,585,680 | + | C1H3g27781 | C2H3g22239 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| CX3g030247 | 3:33,586,070-33,586,342 | - | - | - | LOC_Os03g64310 | Os03g0861000 | - | Detail |
| CX3g027284 | 3:33,587,581-33,597,738 | + | C1H3g04412 | C2H3g11459 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| CX3g030775 | 3:33,599,666-33,600,517 | + | C1H3g25012 | C2H3g28085 | LOC_Os03g64330 | Os03g0861300 | - | Detail |
| CX3g031284 | 3:33,605,410-33,606,785 | - | C1H3g04119 | C2H3g16452 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| CX3g030656 | 3:33,613,530-33,618,194 | - | C1H3g17429 | C2H3g12472 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| CX3g028909 | 3:33,618,497-33,623,655 | + | C1H3g24824 | C2H3g08959 | LOC_Os03g64370 | Os03g0861900 | - | Detail |
| CX3g027005 | 3:33,625,067-33,626,208 | - | - | - | LOC_Os03g64380 | - | - | Detail |
| CX3g028337 | 3:33,626,811-33,628,130 | - | - | - | LOC_Os03g64390 | Os03g0862000 | - | Detail |
| CX3g029193 | 3:33,631,570-33,637,991 | + | C1H3g08341 | C2H3g16629 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| CX3g025867 | 3:33,642,180-33,642,356 | - | - | - | - | Os03g0862200 | - | Detail |
| CX3g027325 | 3:33,642,376-33,643,088 | - | C1H7g10723 | C2H3g28738 | LOC_Os03g64415 | Os07g0105700 | OsDLK | Detail |
| CX4g032077 | 4:11,739-12,138 | + | - | - | - | - | - | Detail |
| CX4g032894 | 4:15,892-19,423 | + | C1H4g00861 | C2H4g13233 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| CX4g034451 | 4:39,257-39,481 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g036339 | 4:42,218-50,111 | + | C1H4g03520 | - | LOC_Os03g21310 | Os08g0514300 | - | Detail |
| CX4g035430 | 4:50,538-52,967 | - | C1H4g27704 | - | LOC_Os08g33270 | Os04g0127900 | - | Detail |
| CX4g034951 | 4:56,100-58,282 | - | - | C2H11g07074 | - | - | - | Detail |