| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11559 | 6:7,255,330-7,270,335 | + | C2H6g03619 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C1H6g18024 | 6:7,271,353-7,279,165 | - | C2H6g01049 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C1H6g12696 | 6:7,308,126-7,312,190 | + | - | - | - | - | - | Detail |
| C1H6g12074 | 6:7,323,736-7,324,242 | - | C2H6g10609 | CX6g041615 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C1H6g28805 | 6:7,357,500-7,361,290 | - | C2H6g15261 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C1H6g14061 | 6:7,506,785-7,508,766 | + | C2H6g11848 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C1H6g03979 | 6:7,524,756-7,530,758 | + | C2H6g27689 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C1H6g31080 | 6:7,529,438-7,529,905 | - | - | - | - | Os06g0264366 | - | Detail |
| C1H6g06916 | 6:7,545,022-7,549,944 | + | C2H6g23695 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C1H6g11951 | 6:7,557,071-7,558,213 | - | C2H6g28756 | CX6g045844 | LOC_Os06g15400 | Os06g0264800 | - | Detail |
| C1H6g10281 | 6:7,558,660-7,563,107 | - | C2H6g22525 | CX6g045672 | LOC_Os06g15410 | Os06g0264900 | - | Detail |
| C1H6g21227 | 6:7,564,056-7,570,765 | - | C2H6g24712 | CX6g044119 | LOC_Os06g15420 | Os06g0265000 | ASN, OsASN2, OsAS, OsAS2, AS2 | Detail |
| C1H6g12077 | 6:7,574,105-7,576,075 | - | C2H6g21757 | CX6g045084 | LOC_Os06g15480 | Os06g0265400 | OsbZIP47 | Detail |
| C1H6g02155 | 6:7,590,434-7,591,816 | + | C2H6g27056 | CX6g043750 | LOC_Os06g15550 | Os06g0265900 | - | Detail |
| C1H6g31082 | 6:7,597,016-7,598,154 | + | - | - | LOC_Os06g15580 | Os06g0266133 | - | Detail |
| C1H6g01727 | 6:7,597,701-7,598,582 | - | C2H6g05541 | - | LOC_Os06g15590 | Os06g0266266 | - | Detail |
| C1H6g06570 | 6:7,599,808-7,600,707 | - | C2H6g11511 | CX6g043643 | LOC_Os06g15600 | Os06g0266400 | - | Detail |
| C1H6g23821 | 6:7,605,503-7,605,939 | - | C2H6g26645 | CX6g041878 | LOC_Os06g15620 | Os06g0266800 | OsGSR1, GW6, OsGASR7 | Detail |
| C1H6g29835 | 6:7,630,855-7,631,136 | - | - | - | - | - | - | Detail |
| C1H6g09354 | 6:7,632,225-7,633,907 | - | C2H6g09819 | CX6g042875 | LOC_Os06g15680 | Os06g0267400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030915 | 3:33,553,003-33,553,569 | - | C1H3g19498 | C2H3g13096 | LOC_Os03g64260 | Os03g0860100 | OsERF83 | Detail |
| CX3g027910 | 3:33,559,446-33,576,186 | - | C1H3g08606 | C2H3g04480 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| CX3g029996 | 3:33,579,728-33,585,680 | + | C1H3g27781 | C2H3g22239 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| CX3g030247 | 3:33,586,070-33,586,342 | - | - | - | LOC_Os03g64310 | Os03g0861000 | - | Detail |
| CX3g027284 | 3:33,587,581-33,597,738 | + | C1H3g04412 | C2H3g11459 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| CX3g030775 | 3:33,599,666-33,600,517 | + | C1H3g25012 | C2H3g28085 | LOC_Os03g64330 | Os03g0861300 | - | Detail |
| CX3g031284 | 3:33,605,410-33,606,785 | - | C1H3g04119 | C2H3g16452 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| CX3g030656 | 3:33,613,530-33,618,194 | - | C1H3g17429 | C2H3g12472 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| CX3g028909 | 3:33,618,497-33,623,655 | + | C1H3g24824 | C2H3g08959 | LOC_Os03g64370 | Os03g0861900 | - | Detail |
| CX3g027005 | 3:33,625,067-33,626,208 | - | - | - | LOC_Os03g64380 | - | - | Detail |
| CX3g028337 | 3:33,626,811-33,628,130 | - | - | - | LOC_Os03g64390 | Os03g0862000 | - | Detail |
| CX3g029193 | 3:33,631,570-33,637,991 | + | C1H3g08341 | C2H3g16629 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| CX3g025867 | 3:33,642,180-33,642,356 | - | - | - | - | Os03g0862200 | - | Detail |
| CX3g027325 | 3:33,642,376-33,643,088 | - | C1H7g10723 | C2H3g28738 | LOC_Os03g64415 | Os07g0105700 | OsDLK | Detail |
| CX4g032077 | 4:11,739-12,138 | + | - | - | - | - | - | Detail |
| CX4g032894 | 4:15,892-19,423 | + | C1H4g00861 | C2H4g13233 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| CX4g034451 | 4:39,257-39,481 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX4g036339 | 4:42,218-50,111 | + | C1H4g03520 | - | LOC_Os03g21310 | Os08g0514300 | - | Detail |
| CX4g035430 | 4:50,538-52,967 | - | C1H4g27704 | - | LOC_Os08g33270 | Os04g0127900 | - | Detail |
| CX4g034951 | 4:56,100-58,282 | - | - | C2H11g07074 | - | - | - | Detail |