| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g11575 | 3:4,853,129-4,854,951 | - | C1H3g05069 | - | LOC_Os03g10755 | Os03g0205150 | - | Detail |
| C2H3g22270 | 3:4,857,649-4,859,068 | - | C1H3g10116 | CX3g030429 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| C2H3g01278 | 3:4,866,930-4,873,920 | + | C1H3g09266 | CX3g028760 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| C2H3g28949 | 3:4,875,624-4,880,617 | + | C1H3g14529 | CX3g029451 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| C2H3g29987 | 3:4,888,751-4,894,118 | + | C1H3g24511 | CX3g026705 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| C2H3g05398 | 3:4,899,115-4,900,581 | - | C1H3g03568 | CX3g029670 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |
| C2H3g12127 | 3:4,907,875-4,923,876 | - | C1H3g13621 | CX3g029010 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| C2H3g24955 | 3:4,929,099-4,930,124 | - | C1H3g08320 | CX3g025706 | - | Os03g0206201 | - | Detail |
| C2H3g24585 | 3:4,930,714-4,933,645 | - | - | CX3g025706 | LOC_Os03g10850 | Os03g0206300 | - | Detail |
| C2H3g09566 | 3:4,940,953-4,941,332 | - | C1H3g09000 | CX3g025152 | LOC_Os03g10860 | Os03g0206400 | - | Detail |
| C2H3g30671 | 3:4,947,099-4,949,576 | + | C1H3g23004 | CX3g025216 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| C2H3g08057 | 3:4,950,823-4,953,586 | - | C1H3g06410 | CX3g028250 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| C2H3g20915 | 3:4,955,081-4,956,932 | + | C1H3g27718 | CX3g028910 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| C2H3g10611 | 3:4,975,076-4,978,039 | - | C1H3g00893 | CX3g026802 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| C2H3g21091 | 3:4,978,897-4,980,830 | - | C1H3g01133 | CX3g025332 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| C2H3g16402 | 3:4,981,310-4,986,362 | - | C1H3g28849 | CX3g026481 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| C2H3g22551 | 3:4,990,851-4,992,610 | + | C1H3g06136 | CX3g026300 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| C2H3g27737 | 3:4,996,506-4,998,757 | + | C1H3g30385 | CX3g028734 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| C2H3g03380 | 3:5,001,193-5,005,112 | - | C1H3g09911 | CX3g029045 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| C2H3g10069 | 3:5,018,641-5,020,233 | + | C1H3g30012 | CX3g026296 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |