| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g30061 | 11:22,913,484-22,913,807 | + | C1H11g08762 | - | LOC_Os11g43520 | Os11g0655900 | - | Detail |
| C2H11g27850 | 11:22,918,071-22,918,400 | + | C1H11g24543 | - | LOC_Os11g43530 | Os11g0656000 | - | Detail |
| C2H11g03558 | 11:22,926,281-22,926,610 | + | C1H11g23714 | - | LOC_Os11g43530 | Os11g0656000 | - | Detail |
| C2H11g05429 | 11:22,931,779-22,941,691 | + | C1H11g06947 | CX11g011080 | LOC_Os11g43600 | Os11g0657100 | - | Detail |
| C2H11g06950 | 11:22,942,355-22,943,822 | - | C1H11g31018 | CX11g014634 | LOC_Os11g43610 | Os11g0657200 | - | Detail |
| C2H11g26337 | 11:22,944,470-22,945,887 | + | C1H11g13451 | CX11g012531 | LOC_Os11g43620 | Os11g0657300 | - | Detail |
| C2H11g06588 | 11:22,947,441-22,951,700 | - | C1H11g19368 | CX11g012696 | LOC_Os11g43640 | Os11g0657400 | OsPEX1 | Detail |
| C2H11g28248 | 11:22,960,258-22,962,136 | - | C1H11g21860 | CX11g013750 | LOC_Os11g43700 | Os11g0657900 | RYMV3 | Detail |
| C2H11g20964 | 11:22,963,060-22,965,122 | - | C1H11g21860 | CX11g013750 | LOC_Os11g43700 | Os11g0657900 | RYMV3 | Detail |
| C2H11g26290 | 11:22,988,712-22,989,247 | + | C1H11g13158 | CX11g013087 | - | - | - | Detail |
| C2H11g25118 | 11:22,991,584-22,992,080 | + | C1H11g13158 | CX11g013087 | - | - | - | Detail |
| C2H11g14074 | 11:23,015,055-23,018,610 | + | C1H11g11705 | CX11g011519 | LOC_Os11g43740 | Os11g0658700 | MADS68, OsMADS68 | Detail |
| C2H11g17023 | 11:23,020,436-23,024,426 | - | C1H11g02191 | CX11g012897 | LOC_Os11g43750 | Os11g0658800 | - | Detail |
| C2H11g13773 | 11:23,037,988-23,041,648 | + | C1H11g19904 | CX11g013779 | LOC_Os11g43760 | Os11g0658900 | - | Detail |
| C2H11g05292 | 11:23,045,684-23,046,226 | + | C1H11g08129 | CX11g013129 | LOC_Os11g43790 | Os11g0659200 | - | Detail |
| C2H11g15771 | 11:23,052,264-23,058,544 | + | C1H11g18532 | CX11g012462 | LOC_Os11g43800 | Os11g0659400 | - | Detail |
| C2H11g22992 | 11:23,058,867-23,063,662 | - | C1H11g21378 | CX11g012970 | LOC_Os11g43820 | Os11g0659500 | - | Detail |
| C2H11g02881 | 11:23,066,532-23,070,414 | - | - | - | - | Os11g0659600 | - | Detail |
| C2H11g25381 | 11:23,072,722-23,075,910 | - | C1H11g03043 | CX11g012115 | LOC_Os11g43840 | Os11g0659700 | - | Detail |
| C2H11g28940 | 11:23,078,880-23,082,799 | - | C1H11g13673 | CX11g014804 | LOC_Os11g43860 | Os11g0660000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |