| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28492 | 9:4,491,035-4,498,628 | + | C1H9g06763 | CX9g055629 | LOC_Os09g09470 | Os09g0267500 | - | Detail |
| C2H9g02970 | 9:4,501,499-4,505,244 | + | C1H9g16484 | CX9g056945 | LOC_Os09g09480 | Os09g0267600 | - | Detail |
| C2H9g11765 | 9:4,511,919-4,512,950 | + | - | CX9g057502 | LOC_Os09g09490 | Os09g0267800 | - | Detail |
| C2H9g18374 | 9:4,601,326-4,605,053 | + | C1H9g25249 | - | - | - | - | Detail |
| C2H9g21323 | 9:4,653,714-4,655,933 | - | C1H9g14847 | CX9g056003 | LOC_Os09g09790 | Os09g0270900 | - | Detail |
| C2H9g20765 | 9:4,673,201-4,673,536 | - | - | CX9g057201 | LOC_Os09g09810 | - | - | Detail |
| C2H9g23545 | 9:4,691,144-4,691,861 | - | C1H9g28290 | CX9g055328 | LOC_Os09g09830 | Os09g0271100 | OsHIPP21 | Detail |
| C2H9g20381 | 9:4,729,967-4,730,269 | - | C1H9g21029 | CX9g056914 | LOC_Os09g09850 | Os09g0271100 | OsHIPP21 | Detail |
| C2H9g04956 | 9:4,752,712-4,753,506 | - | C1H9g25101 | CX9g055564 | LOC_Os09g09930 | Os09g0272000 | OsHIPP17 | Detail |
| C2H9g29443 | 9:4,760,101-4,761,832 | - | C1H9g30109 | - | - | - | - | Detail |
| C2H9g08811 | 9:4,795,311-4,797,604 | + | C1H9g18393 | CX9g057268 | LOC_Os09g09980 | Os09g0272300 | - | Detail |
| C2H9g06730 | 9:4,798,060-4,798,503 | - | C1H9g26091 | CX9g055161 | - | Os09g0272401 | - | Detail |
| C2H9g24324 | 9:4,800,905-4,804,529 | - | C1H9g17105 | CX9g055756 | LOC_Os09g10000 | Os09g0272500 | - | Detail |
| C2H9g05170 | 9:4,809,006-4,809,582 | + | C1H9g19656 | CX9g057482 | LOC_Os09g10010 | Os09g0272600 | - | Detail |
| C2H9g18733 | 9:4,816,690-4,817,223 | - | C1H9g25335 | CX9g057777 | LOC_Os09g10270 | Os09g0274800 | - | Detail |
| C2H9g23912 | 9:4,824,057-4,824,414 | - | - | - | - | - | - | Detail |
| C2H9g16515 | 9:4,824,430-4,827,926 | - | - | CX9g057643 | LOC_Os09g10054 | Os09g0272900 | - | Detail |
| C2H9g21933 | 9:4,865,893-4,866,300 | - | C1H9g21803 | CX9g056828 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| C2H9g04595 | 9:4,867,047-4,867,618 | - | - | - | - | - | - | Detail |
| C2H9g06099 | 9:4,906,124-4,906,618 | - | C1H9g25335 | CX9g056828 | LOC_Os09g10260 | Os09g0273800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |