| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23460 | 6:10,158,677-10,159,365 | + | C1H6g06056 | CX6g044894 | - | Os06g0316950 | - | Detail |
| C2H6g29048 | 6:10,162,508-10,163,388 | - | C1H6g25626 | CX6g042665 | - | - | - | Detail |
| C2H6g09461 | 6:10,164,014-10,164,559 | - | - | CX6g045107 | - | - | - | Detail |
| C2H6g18604 | 6:10,167,979-10,169,161 | + | C1H6g09647 | CX6g044894 | LOC_Os06g21240 | Os06g0317200 | - | Detail |
| C2H6g21088 | 6:10,186,509-10,186,850 | + | C1H6g25604 | - | - | - | - | Detail |
| C2H6g24536 | 6:10,191,494-10,191,871 | + | C1H6g13835 | - | - | - | - | Detail |
| C2H6g22946 | 6:10,206,143-10,206,691 | + | C1H6g02304 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C2H6g06961 | 6:10,207,641-10,208,888 | + | C1H6g29323 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C2H6g04069 | 6:10,210,934-10,213,723 | - | C1H6g20482 | CX6g041422 | - | Os06g0318300 | - | Detail |
| C2H6g06294 | 6:10,219,481-10,224,201 | + | C1H6g31652 | CX6g041234 | LOC_Os06g21360 | Os06g0318500 | - | Detail |
| C2H6g16674 | 6:10,235,273-10,239,113 | + | C1H6g10203 | CX6g044274 | LOC_Os06g21380 | Os06g0318600 | - | Detail |
| C2H6g23908 | 6:10,242,154-10,247,931 | + | C1H6g17249 | CX6g041922 | LOC_Os06g21390 | Os06g0318700 | MKRN, OsSIRP3 | Detail |
| C2H6g29333 | 6:10,259,198-10,263,102 | - | C1H6g24512 | - | - | Os06g0319366 | - | Detail |
| C2H6g12588 | 6:10,259,274-10,260,473 | + | - | - | LOC_Os06g21410 | Os06g0319133 | OSJAGP | Detail |
| C2H6g05819 | 6:10,264,575-10,270,453 | + | C1H6g15030 | CX6g043466 | LOC_Os06g21470 | Os06g0319600 | - | Detail |
| C2H6g22687 | 6:10,315,046-10,317,750 | + | C1H6g23192 | CX6g044246 | LOC_Os06g21480 | Os06g0319700 | - | Detail |
| C2H6g04460 | 6:10,318,412-10,319,074 | - | - | CX6g044564 | LOC_Os06g21530 | Os06g0319800 | - | Detail |
| C2H6g30426 | 6:10,323,736-10,324,252 | - | C1H6g14935 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| C2H6g00743 | 6:10,325,794-10,329,181 | + | C1H6g07888 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C2H6g13117 | 6:10,329,576-10,334,164 | - | C1H6g15151 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |