| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g08772 | 5:21,033,345-21,041,073 | + | C2H5g13659 | CX5g038489 | LOC_Os05g44210 | Os05g0518600 | OsTPS1 | Detail |
| C1H5g24612 | 5:21,050,315-21,050,716 | + | C2H5g28427 | CX5g040893 | LOC_Os05g44260 | Os05g0518800 | OsS40-2 | Detail |
| C1H5g01128 | 5:21,062,880-21,063,692 | + | C2H5g28470 | CX5g040062 | LOC_Os05g44270 | Os05g0519000 | - | Detail |
| C1H5g07867 | 5:21,073,438-21,077,564 | + | C2H5g30115 | CX5g038803 | LOC_Os05g44290 | Os05g0519200 | - | Detail |
| C1H5g30314 | 5:21,078,520-21,080,986 | - | C2H5g03043 | CX5g038305 | LOC_Os05g44300 | Os05g0519300 | OsDUF50606 | Detail |
| C1H5g04824 | 5:21,084,213-21,090,835 | - | C2H5g21922 | CX5g038313 | LOC_Os05g44310 | Os05g0519400 | - | Detail |
| C1H5g25319 | 5:21,091,210-21,095,706 | - | C2H5g04929 | CX5g039441 | LOC_Os05g44320 | Os05g0519500 | - | Detail |
| C1H5g00452 | 5:21,100,341-21,105,652 | + | C2H5g22047 | CX5g038744 | LOC_Os05g44330 | Os05g0519600 | - | Detail |
| C1H5g17989 | 5:21,106,020-21,109,669 | - | C2H5g05695 | CX5g037782 | LOC_Os05g44340 | Os05g0519700 | - | Detail |
| C1H5g30392 | 5:21,110,362-21,113,474 | + | C2H5g00768 | CX5g040719 | LOC_Os05g44350 | Os05g0519800 | - | Detail |
| C1H5g16249 | 5:21,113,942-21,119,784 | - | C2H5g18682 | CX5g037061 | LOC_Os05g44360 | Os05g0519900 | - | Detail |
| C1H5g12015 | 5:21,122,393-21,124,535 | - | C2H5g28805 | CX5g038893 | LOC_Os05g44380 | Os05g0520100 | - | Detail |
| C1H5g13206 | 5:21,126,504-21,128,476 | - | C2H5g23024 | CX5g039614 | LOC_Os05g44390 | Os05g0520200 | - | Detail |
| C1H5g27133 | 5:21,134,556-21,136,630 | + | C2H5g29984 | CX5g041084 | LOC_Os05g44400 | Os05g0520300 | - | Detail |
| C1H5g30703 | 5:21,147,572-21,148,556 | + | C2H5g01469 | CX5g037559 | LOC_Os05g44410 | Os05g0202600 | - | Detail |
| C1H5g26951 | 5:21,166,455-21,167,405 | + | C2H5g12159 | CX5g037160 | LOC_Os05g44420 | Os05g0520600 | - | Detail |
| C1H5g09160 | 5:21,189,885-21,192,456 | + | C2H5g11007 | CX2g020717 | LOC_Os05g44550 | - | - | Detail |
| C1H5g15943 | 5:21,194,908-21,202,479 | - | C2H5g01580 | CX5g037570 | LOC_Os05g44560 | Os05g0397900 | - | Detail |
| C1H5g15028 | 5:21,204,968-21,207,391 | - | C2H5g06721 | CX5g040762 | LOC_Os05g44570 | Os05g0521300 | - | Detail |
| C1H5g27271 | 5:21,211,448-21,215,028 | + | C2H5g11284 | CX5g040709 | - | Os05g0521400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |