| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05922 | 4:20,989,401-20,990,075 | - | C2H4g14421 | CX4g035067 | LOC_Os04g40620 | Os04g0482100 | - | Detail |
| C1H4g16338 | 4:21,005,842-21,009,927 | + | C2H4g11201 | CX4g036562 | LOC_Os04g40630 | Os04g0482300 | - | Detail |
| C1H4g12073 | 4:21,015,109-21,015,434 | - | C2H4g13783 | CX4g036028 | LOC_Os04g40640 | Os04g0482600 | - | Detail |
| C1H4g31403 | 4:21,018,182-21,021,539 | - | C2H4g17042 | CX4g036343 | LOC_Os04g40650 | Os04g0482700 | - | Detail |
| C1H4g18067 | 4:21,022,285-21,026,763 | - | C2H4g09234 | CX4g032655 | LOC_Os04g40660 | Os04g0482800 | - | Detail |
| C1H4g04900 | 4:21,027,939-21,030,737 | - | C2H4g06345 | CX4g032113 | LOC_Os04g40670 | Os04g0482900 | - | Detail |
| C1H4g26441 | 4:21,034,800-21,036,339 | + | C2H4g21173 | CX4g035699 | LOC_Os04g40680 | Os04g0483000 | - | Detail |
| C1H4g10284 | 4:21,050,920-21,055,248 | + | C2H4g26991 | CX4g036074 | LOC_Os04g40700 | Os04g0483200 | - | Detail |
| C1H4g11147 | 4:21,055,402-21,061,920 | - | C2H4g13170 | CX4g035331 | LOC_Os04g40720 | Os04g0483400 | OsSUBSrP1 | Detail |
| C1H4g14843 | 4:21,064,074-21,066,759 | - | C2H4g15487 | CX4g031522 | LOC_Os04g40730 | Os04g0483500 | KCR1, OsKCR1, WSL3 | Detail |
| C1H4g00579 | 4:21,068,827-21,075,415 | - | C2H4g03640 | CX4g033297 | LOC_Os04g40740 | Os04g0483600 | - | Detail |
| C1H4g22602 | 4:21,085,319-21,087,158 | - | C2H4g28314 | CX4g032598 | LOC_Os04g40780 | Os04g0651600 | - | Detail |
| C1H4g22234 | 4:21,091,599-21,094,356 | - | - | - | - | - | - | Detail |
| C1H4g21664 | 4:21,099,933-21,103,866 | - | - | - | - | Os04g0484300 | - | Detail |
| C1H4g19344 | 4:21,106,783-21,114,397 | + | C2H4g03392 | CX4g034516 | LOC_Os04g40830 | Os04g0484800 | - | Detail |
| C1H4g05361 | 4:21,114,834-21,118,208 | - | C2H4g06907 | CX4g032355 | LOC_Os04g40840 | Os04g0484900 | OsELP3 | Detail |
| C1H4g09149 | 4:21,118,533-21,121,247 | + | C2H4g29472 | CX4g035127 | LOC_Os04g40850 | Os04g0485000 | OsRpn7 | Detail |
| C1H4g21128 | 4:21,121,407-21,125,360 | - | C2H4g14931 | CX4g034685 | LOC_Os04g40860 | Os04g0485100 | - | Detail |
| C1H4g16250 | 4:21,129,723-21,132,835 | + | C2H4g07215 | CX4g032126 | LOC_Os04g40870 | Os04g0485200 | - | Detail |
| C1H4g02206 | 4:21,136,774-21,143,200 | + | C2H4g19727 | CX4g032384 | LOC_Os04g40874 | Os04g0485300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |