| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19279 | 3:26,043,776-26,047,026 | + | C2H3g22251 | CX3g031355 | LOC_Os03g48810 | Os03g0694500 | - | Detail |
| C1H3g26684 | 3:26,058,471-26,066,396 | + | C2H3g26534 | CX3g030087 | LOC_Os03g48850 | Os03g0694900 | - | Detail |
| C1H3g09569 | 3:26,084,077-26,087,984 | + | C2H3g18441 | CX3g027739 | LOC_Os03g48920 | Os03g0695500 | - | Detail |
| C1H3g24942 | 3:26,088,070-26,090,383 | - | C2H3g02189 | CX3g031086 | LOC_Os03g48930 | Os03g0695600 | - | Detail |
| C1H3g15935 | 3:26,091,097-26,101,605 | - | C2H3g02669 | CX3g031322 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| C1H3g18763 | 3:26,105,108-26,106,031 | + | C2H3g25659 | CX3g027930 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| C1H3g06932 | 3:26,113,541-26,115,141 | + | C2H8g18549 | - | - | Os10g0410100 | - | Detail |
| C1H3g17032 | 3:26,120,772-26,124,777 | + | C2H3g00519 | CX3g026991 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| C1H3g13231 | 3:26,130,462-26,137,603 | + | C2H3g19190 | CX3g031047 | LOC_Os03g49010 | Os03g0565900 | - | Detail |
| C1H3g02064 | 3:26,146,775-26,149,114 | + | C2H3g17803 | CX3g029768 | LOC_Os03g49050 | Os03g0109300 | - | Detail |
| C1H3g16785 | 3:26,157,063-26,160,492 | + | C2H3g15504 | CX3g028722 | LOC_Os03g49126 | Os03g0697833 | - | Detail |
| C1H3g27645 | 3:26,163,591-26,168,775 | - | C2H3g27379 | CX3g029661 | LOC_Os03g49140 | Os03g0698350 | - | Detail |
| C1H3g28768 | 3:26,172,449-26,175,630 | + | C2H3g20960 | CX3g030702 | LOC_Os03g49150 | Os03g0698500 | - | Detail |
| C1H3g04379 | 3:26,183,997-26,187,527 | + | C2H3g00073 | CX3g025989 | LOC_Os03g49170 | Os03g0698800 | - | Detail |
| C1H3g08733 | 3:26,188,892-26,192,726 | - | C2H3g03385 | CX3g029194 | LOC_Os03g49180 | Os03g0698900 | - | Detail |
| C1H3g14380 | 3:26,196,374-26,200,891 | - | C2H3g06339 | CX3g027765 | LOC_Os03g49200 | Os03g0699100 | - | Detail |
| C1H3g06128 | 3:26,202,821-26,208,428 | + | C2H3g19400 | CX3g025779 | LOC_Os03g49210 | Os03g0699200 | - | Detail |
| C1H3g23737 | 3:26,208,949-26,212,072 | + | C2H3g05406 | CX3g029958 | LOC_Os03g49220 | Os03g0699300 | - | Detail |
| C1H3g16011 | 3:26,213,035-26,215,781 | - | C2H3g18347 | CX3g028209 | LOC_Os03g49230 | Os03g0699400 | - | Detail |
| C1H3g30535 | 3:26,218,732-26,220,224 | + | C2H3g00103 | CX3g029586 | LOC_Os03g49250 | Os03g0699600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |