| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15725 | 2:14,990,942-14,992,953 | + | C2H2g14964 | CX2g021903 | LOC_Os02g26300 | Os02g0461200 | - | Detail |
| C1H2g08562 | 2:14,993,940-14,995,741 | + | C2H2g14964 | - | LOC_Os02g26300 | Os02g0461200 | - | Detail |
| C1H2g18802 | 2:15,028,419-15,031,508 | - | C2H2g01724 | CX2g020756 | LOC_Os02g26370 | Os02g0461900 | - | Detail |
| C1H2g15670 | 2:15,035,329-15,035,805 | + | C2H2g28389 | - | - | - | - | Detail |
| C1H2g03987 | 2:15,040,839-15,048,931 | + | C2H2g01116 | - | - | - | - | Detail |
| C1H2g09069 | 2:15,054,256-15,059,889 | - | C2H2g28297 | CX2g021428 | LOC_Os02g26400 | Os02g0462300 | - | Detail |
| C1H2g27968 | 2:15,064,343-15,066,192 | + | - | - | - | - | - | Detail |
| C1H2g21982 | 2:15,067,648-15,068,592 | + | C2H2g04148 | CX2g022930 | LOC_Os02g26430 | Os02g0462800 | WRKY42, OsWRKY42 | Detail |
| C1H2g26806 | 2:15,070,053-15,077,433 | + | C2H2g20091 | CX2g022979 | LOC_Os02g26440 | Os02g0462900 | - | Detail |
| C1H2g18666 | 2:15,090,883-15,091,801 | - | C2H2g05390 | - | LOC_Os02g26470 | Os02g0463401 | - | Detail |
| C1H2g19353 | 2:15,096,441-15,101,213 | - | C2H2g12721 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C1H2g22877 | 2:15,103,565-15,103,789 | - | C2H2g12721 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C1H2g26039 | 2:15,122,512-15,126,874 | + | C2H2g18685 | CX2g022576 | LOC_Os02g26560 | Os02g0464500 | - | Detail |
| C1H2g02830 | 2:15,133,571-15,137,248 | - | C2H2g05215 | CX2g020584 | LOC_Os02g26600 | Os02g0464900 | - | Detail |
| C1H2g24229 | 2:15,153,976-15,160,295 | - | C2H2g20421 | CX2g024852 | LOC_Os02g26650 | Os02g0465400 | OsDHCR7 | Detail |
| C1H2g12128 | 2:15,178,293-15,180,504 | - | - | - | - | - | - | Detail |
| C1H2g25809 | 2:15,182,545-15,186,784 | - | C2H2g06691 | CX2g022338 | LOC_Os02g26660 | Os02g0465500 | - | Detail |
| C1H2g20670 | 2:15,199,345-15,202,563 | - | C2H2g12733 | CX2g019150 | LOC_Os02g26700 | Os02g0465900 | OsARP, OsCTP | Detail |
| C1H2g16591 | 2:15,239,849-15,242,066 | - | C2H2g15284 | CX2g022703 | LOC_Os02g26770 | Os02g0467600 | - | Detail |
| C1H2g27142 | 2:15,251,344-15,253,351 | + | C2H2g11442 | CX2g020093 | LOC_Os02g26810 | Os02g0467600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027057 | 3:33,423,473-33,424,569 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g63970 | Os03g0856700 | GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2 | Detail |
| CX3g029621 | 3:33,435,867-33,438,011 | - | C1H3g20639 | C2H3g11890 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| CX3g025931 | 3:33,439,852-33,441,396 | - | C1H3g22114 | C2H3g15877 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| CX3g028833 | 3:33,444,245-33,444,919 | + | C1H3g22114 | C2H3g15877 | LOC_Os03g64050 | Os03g0857600 | - | Detail |
| CX3g025519 | 3:33,447,646-33,448,083 | - | - | - | - | - | - | Detail |
| CX3g028554 | 3:33,454,655-33,455,316 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g64070 | Os03g0857900 | - | Detail |
| CX3g027831 | 3:33,458,648-33,468,355 | - | C1H3g29403 | C2H3g02920 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| CX3g026648 | 3:33,470,184-33,470,603 | - | C1H3g01357 | C2H3g25733 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| CX3g030847 | 3:33,474,415-33,478,278 | + | C1H3g08857 | C2H3g02150 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| CX3g025410 | 3:33,483,623-33,485,056 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g64130 | Os03g0858600 | - | Detail |
| CX3g029022 | 3:33,486,063-33,489,011 | - | C1H3g16247 | C2H3g17790 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| CX3g028143 | 3:33,496,966-33,498,411 | - | C1H3g22208 | C2H3g03018 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| CX3g029038 | 3:33,503,843-33,506,770 | - | C1H3g22606 | C2H3g13548 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| CX3g031056 | 3:33,514,010-33,519,354 | - | C1H3g07086 | C2H3g16125 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| CX3g029704 | 3:33,520,361-33,520,555 | + | - | - | - | - | - | Detail |
| CX3g029460 | 3:33,521,890-33,526,481 | - | C1H3g08038 | C2H3g24116 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| CX3g028741 | 3:33,529,826-33,533,070 | - | C1H3g08107 | C2H3g24534 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| CX3g027116 | 3:33,535,545-33,537,976 | - | C1H3g16052 | C2H3g16421 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| CX3g027684 | 3:33,542,680-33,545,129 | + | C1H3g15087 | C2H3g04803 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| CX3g030691 | 3:33,545,774-33,547,768 | + | C1H3g16330 | C2H3g08868 | LOC_Os03g64250 | Os03g0860000 | - | Detail |