| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01060 | 1:33,229,555-33,231,475 | + | C2H1g28759 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C1H1g05827 | 1:33,232,645-33,239,006 | + | C2H1g28759 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C1H1g05655 | 1:33,239,740-33,242,023 | + | C2H1g15067 | CX1g001594 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| C1H1g18522 | 1:33,243,518-33,247,182 | + | C2H1g28339 | CX1g006145 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| C1H1g30751 | 1:33,247,478-33,250,816 | - | C2H1g30207 | CX1g001130 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| C1H1g06977 | 1:33,252,925-33,255,455 | - | C2H1g00754 | CX1g003660 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| C1H1g15696 | 1:33,276,560-33,281,262 | - | C2H1g16482 | CX1g001548 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| C1H1g06751 | 1:33,284,709-33,294,966 | - | C2H1g13803 | CX1g000694 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| C1H1g19072 | 1:33,298,865-33,299,481 | - | - | - | - | - | - | Detail |
| C1H1g05607 | 1:33,301,255-33,302,712 | + | C2H1g19050 | CX1g005471 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| C1H1g26609 | 1:33,305,254-33,307,527 | + | C2H1g17354 | CX1g000216 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| C1H1g03086 | 1:33,310,024-33,312,294 | + | C2H1g27055 | CX1g007065 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| C1H1g21599 | 1:33,313,672-33,319,803 | - | C2H1g17173 | CX1g007144 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| C1H1g30307 | 1:33,320,978-33,323,357 | + | C2H1g09905 | CX1g007080 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| C1H1g30705 | 1:33,323,921-33,328,815 | - | C2H1g24941 | CX1g002156 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| C1H1g03661 | 1:33,330,416-33,338,022 | - | C2H1g06937 | CX1g002156 | LOC_Os01g64900 | - | - | Detail |
| C1H1g15596 | 1:33,338,916-33,340,370 | - | C2H1g09241 | CX1g003337 | LOC_Os01g64910 | Os01g0869400 | - | Detail |
| C1H1g25047 | 1:33,342,831-33,345,247 | - | C2H1g30680 | CX1g002614 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| C1H1g19257 | 1:33,346,677-33,349,188 | + | C2H1g14315 | CX1g001436 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| C1H1g00245 | 1:33,350,586-33,353,154 | + | C2H1g12747 | CX1g002829 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030851 | 3:33,290,992-33,293,926 | - | C1H3g07991 | C2H3g19461 | LOC_Os03g63710 | Os03g0854100 | - | Detail |
| CX3g029131 | 3:33,295,467-33,297,645 | - | C1H3g26847 | C2H3g19461 | LOC_Os03g63720 | Os03g0854200 | - | Detail |
| CX3g030107 | 3:33,297,957-33,300,844 | + | C1H3g06335 | C2H3g12825 | LOC_Os03g63730 | Os03g0854300 | - | Detail |
| CX3g028502 | 3:33,301,710-33,302,078 | - | - | C2H3g15962 | LOC_Os03g63740 | Os03g0854400 | - | Detail |
| CX3g030892 | 3:33,303,603-33,306,932 | + | C1H3g09693 | C2H3g05253 | LOC_Os03g63750 | Os03g0854500 | - | Detail |
| CX3g029838 | 3:33,309,427-33,310,433 | - | C1H3g19243 | C2H3g28167 | LOC_Os03g63760 | Os03g0854600 | - | Detail |
| CX3g026422 | 3:33,320,209-33,323,359 | - | C1H3g21186 | C2H3g30198 | LOC_Os03g63770 | Os03g0854800 | - | Detail |
| CX3g028349 | 3:33,325,063-33,325,389 | - | - | - | - | - | - | Detail |
| CX3g029874 | 3:33,335,934-33,340,283 | + | C1H3g13485 | C2H3g14845 | LOC_Os03g63810 | Os03g0855100 | OsWRKY80 | Detail |
| CX3g027785 | 3:33,357,829-33,358,017 | + | - | - | - | - | - | Detail |
| CX3g029132 | 3:33,364,540-33,365,655 | + | C1H3g14280 | C2H3g28127 | LOC_Os03g63850 | Os03g0855500 | - | Detail |
| CX3g027978 | 3:33,366,406-33,369,833 | + | C1H3g01539 | C2H3g23266 | LOC_Os03g63860 | Os03g0855600 | - | Detail |
| CX3g028921 | 3:33,374,376-33,374,642 | + | C1H3g03427 | C2H3g05415 | LOC_Os03g63890 | Os03g0252900 | - | Detail |
| CX3g027688 | 3:33,377,251-33,378,354 | + | C1H3g10625 | C2H3g09898 | LOC_Os03g63900 | Os03g0856000 | - | Detail |
| CX3g027652 | 3:33,380,652-33,381,599 | - | C1H3g26452 | - | LOC_Os08g09610 | Os08g0195400 | - | Detail |
| CX3g031335 | 3:33,382,187-33,386,786 | + | C1H3g25641 | C2H3g04375 | LOC_Os03g63910 | Os03g0856150 | - | Detail |
| CX3g030971 | 3:33,388,690-33,393,236 | + | C1H3g17906 | - | LOC_Os03g63920 | Os03g0856200 | OsKu80 | Detail |
| CX3g030579 | 3:33,393,817-33,395,848 | - | C1H3g22746 | C2H3g28643 | LOC_Os03g63930 | Os03g0856300 | - | Detail |
| CX3g028093 | 3:33,398,886-33,405,339 | + | C1H3g30692 | C2H3g16257 | LOC_Os03g63940 | Os03g0856400 | - | Detail |
| CX3g031181 | 3:33,406,509-33,408,028 | + | C1H3g30692 | C2H3g23494 | LOC_Os03g63950 | Os03g0856500 | - | Detail |