| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027614 | 3:33,179,802-33,183,269 | - | C1H3g18156 | C2H3g01754 | LOC_Os03g63430 | Os03g0851300 | - | Detail |
| CX3g026223 | 3:33,186,409-33,189,096 | + | C1H3g10494 | C2H3g16528 | LOC_Os03g63440 | Os03g0851400 | - | Detail |
| CX3g027143 | 3:33,192,251-33,194,290 | + | C1H3g02761 | - | LOC_Os03g63450 | Os03g0851500 | OsRad52-2a | Detail |
| CX3g028446 | 3:33,195,692-33,203,935 | + | C1H3g29898 | C2H3g27557 | LOC_Os03g63480 | Os03g0851700 | Xbos251, XBOS251 | Detail |
| CX3g030221 | 3:33,204,901-33,207,205 | + | C1H3g20484 | C2H3g08313 | LOC_Os03g63490 | Os03g0851800 | - | Detail |
| CX3g031225 | 3:33,208,566-33,214,726 | - | C1H3g03202 | C2H3g19287 | LOC_Os03g63500 | Os03g0851900 | - | Detail |
| CX3g024991 | 3:33,217,828-33,218,392 | - | C1H3g01639 | C2H3g14849 | - | - | - | Detail |
| CX3g029990 | 3:33,221,818-33,228,498 | - | C1H3g16711 | C2H3g22448 | LOC_Os03g63520 | Os03g0852200 | - | Detail |
| CX3g027065 | 3:33,232,305-33,235,180 | + | C1H3g08912 | C2H3g22869 | LOC_Os03g63530 | Os03g0852300 | - | Detail |
| CX3g031065 | 3:33,241,262-33,242,433 | + | C1H3g10475 | C2H3g11356 | LOC_Os03g63554 | Os03g0852600 | - | Detail |
| CX3g030002 | 3:33,242,786-33,244,333 | - | C1H3g23484 | C2H3g17418 | LOC_Os03g63560 | Os03g0852700 | - | Detail |
| CX3g026512 | 3:33,247,713-33,249,245 | + | C1H3g26880 | C2H3g05353 | LOC_Os03g63580 | Os03g0852800 | - | Detail |
| CX3g031167 | 3:33,249,824-33,252,472 | - | C1H3g26435 | C2H3g06256 | LOC_Os03g63590 | Os03g0852900 | - | Detail |
| CX3g026225 | 3:33,253,286-33,253,587 | - | - | C2H3g10564 | LOC_Os03g57569 | - | - | Detail |
| CX3g030956 | 3:33,263,683-33,270,942 | + | C1H3g17861 | C2H3g10131 | LOC_Os03g63650 | Os03g0853500 | OsBRXL2, OsBRXL4 | Detail |
| CX3g026797 | 3:33,271,969-33,276,309 | - | C1H3g31296 | C2H3g04339 | LOC_Os03g63660 | Os03g0853600 | - | Detail |
| CX3g030543 | 3:33,280,338-33,283,214 | - | C1H3g27569 | C2H3g06882 | LOC_Os03g63670 | Os03g0853700 | - | Detail |
| CX3g027709 | 3:33,283,632-33,285,200 | + | C1H3g11918 | C2H3g26724 | LOC_Os03g63680 | Os03g0853800 | - | Detail |
| CX3g030379 | 3:33,286,183-33,288,497 | - | C1H3g26162 | C2H3g11272 | LOC_Os03g63690 | Os03g0853900 | - | Detail |
| CX3g026480 | 3:33,288,817-33,289,383 | + | - | C2H3g01478 | LOC_Os03g63700 | Os03g0854000 | - | Detail |