| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24840 | 2:1,459,227-1,460,306 | - | C1H2g22701 | CX2g023931 | LOC_Os02g03810 | Os02g0130800 | - | Detail |
| C2H2g02495 | 2:1,460,596-1,464,462 | + | C1H2g15224 | CX2g024589 | LOC_Os02g03820 | Os02g0130900 | - | Detail |
| C2H2g19848 | 2:1,474,131-1,487,088 | + | C1H2g22468 | CX2g021664 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| C2H2g29791 | 2:1,489,744-1,494,355 | - | C1H2g15765 | CX2g022294 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| C2H2g01875 | 2:1,494,950-1,498,086 | + | C1H2g24459 | CX2g022118 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| C2H2g19732 | 2:1,501,219-1,507,407 | - | C1H2g13894 | CX2g019313 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| C2H2g21277 | 2:1,515,090-1,518,459 | - | C1H2g05041 | CX2g020563 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| C2H2g13835 | 2:1,522,048-1,525,853 | - | C1H2g18848 | CX2g019095 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| C2H2g22540 | 2:1,530,555-1,535,423 | - | C1H2g00924 | CX2g019802 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| C2H2g12575 | 2:1,535,853-1,539,352 | - | C1H2g01456 | CX2g018957 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| C2H2g02428 | 2:1,543,985-1,546,846 | + | C1H2g17223 | CX2g021626 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| C2H2g10653 | 2:1,558,042-1,558,651 | - | C1H2g04467 | CX2g021994 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| C2H2g24972 | 2:1,571,267-1,580,224 | - | C1H2g04799 | CX2g024093 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| C2H2g13962 | 2:1,595,705-1,597,622 | - | C1H2g29927 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C2H2g06861 | 2:1,598,314-1,598,631 | - | C1H2g29927 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C2H2g19617 | 2:1,602,687-1,606,437 | - | C1H2g20335 | CX2g022112 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| C2H2g07026 | 2:1,612,616-1,621,430 | + | C1H2g27472 | CX2g024675 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| C2H2g19093 | 2:1,622,017-1,623,109 | - | C1H2g25242 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C2H2g19264 | 2:1,623,332-1,626,294 | - | C1H2g25242 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C2H2g26953 | 2:1,627,447-1,650,977 | - | C1H2g18206 | CX2g024350 | LOC_Os02g04080 | Os02g0133300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027463 | 3:32,838,770-32,843,786 | - | C1H3g10496 | C2H3g23134 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| CX3g031342 | 3:32,849,073-32,852,498 | - | C1H3g17885 | C2H3g17763 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| CX3g030069 | 3:32,853,428-32,857,948 | - | C1H3g03752 | C2H3g05770 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| CX3g028979 | 3:32,859,277-32,862,041 | - | C1H3g30697 | C2H3g27419 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| CX3g025236 | 3:32,864,064-32,867,407 | - | C1H3g04157 | C2H3g06584 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| CX3g030470 | 3:32,867,057-32,867,257 | + | - | - | - | - | - | Detail |
| CX3g029211 | 3:32,872,120-32,873,541 | + | - | - | LOC_Os03g59940 | Os03g0814200 | - | Detail |
| CX3g031204 | 3:32,881,982-32,886,895 | - | C1H3g04020 | C2H3g22865 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| CX3g029829 | 3:32,889,850-32,894,250 | - | C1H3g13920 | C2H3g23885 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| CX3g026451 | 3:32,900,598-32,901,248 | + | - | - | LOC_Os03g55810 | Os03g0743650 | - | Detail |
| CX3g029998 | 3:32,910,327-32,912,865 | + | C1H3g00003 | C2H3g18445 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| CX3g025495 | 3:32,914,589-32,916,345 | - | C1H3g05358 | C2H3g22112 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| CX3g028475 | 3:32,918,421-32,919,779 | - | C1H3g18020 | C2H3g14550 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| CX3g027527 | 3:32,921,995-32,925,524 | + | C1H3g24850 | C2H3g06127 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| CX3g028344 | 3:32,926,171-32,928,530 | - | C1H3g01007 | C2H3g01988 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| CX3g025686 | 3:32,928,877-32,930,405 | + | C1H3g21046 | C2H3g11755 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| CX3g027867 | 3:32,931,099-32,936,673 | - | C1H3g08743 | C2H3g01237 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| CX3g030484 | 3:32,937,783-32,944,718 | + | C1H3g28947 | C2H3g27702 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| CX3g029476 | 3:32,946,748-32,949,689 | + | C1H3g22971 | C2H3g20877 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| CX3g026603 | 3:32,951,693-32,953,293 | + | C1H3g08128 | C2H3g21220 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |