| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19266 | 1:31,509,696-31,513,272 | - | C1H1g00383 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C2H1g14897 | 1:31,519,060-31,524,680 | + | C1H1g00574 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C2H1g11131 | 1:31,539,536-31,545,198 | + | C1H1g31694 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C2H1g22191 | 1:31,557,505-31,562,700 | + | C1H1g07002 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C2H1g03571 | 1:31,563,054-31,565,051 | + | C1H1g10107 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C2H1g17085 | 1:31,565,343-31,568,129 | - | C1H1g13635 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C2H1g00983 | 1:31,572,935-31,573,270 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833150 | - | Detail |
| C2H1g27052 | 1:31,573,508-31,576,185 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C2H1g24837 | 1:31,577,218-31,577,884 | + | C1H1g07552 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C2H1g22767 | 1:31,578,637-31,582,534 | - | C1H1g26345 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C2H1g05497 | 1:31,583,766-31,584,739 | - | C1H1g02922 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C2H1g26726 | 1:31,585,550-31,592,623 | - | C1H1g09497 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C2H1g11920 | 1:31,594,680-31,598,908 | - | C1H1g22933 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C2H1g18321 | 1:31,610,325-31,616,645 | + | C1H1g06428 | CX1g005181 | - | Os01g0663400 | - | Detail |
| C2H1g11202 | 1:31,625,734-31,626,432 | + | C1H1g08789 | - | LOC_Os01g61750 | - | - | Detail |
| C2H1g03973 | 1:31,626,307-31,630,738 | - | C1H1g12416 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C2H1g25411 | 1:31,635,422-31,646,181 | + | C1H1g06212 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C2H1g04378 | 1:31,652,315-31,654,763 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g11057 | 1:31,654,816-31,655,016 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g10042 | 1:31,660,441-31,661,642 | - | C1H1g07712 | CX1g001710 | LOC_Os01g61814 | Os01g0834500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027463 | 3:32,838,770-32,843,786 | - | C1H3g10496 | C2H3g23134 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| CX3g031342 | 3:32,849,073-32,852,498 | - | C1H3g17885 | C2H3g17763 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| CX3g030069 | 3:32,853,428-32,857,948 | - | C1H3g03752 | C2H3g05770 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| CX3g028979 | 3:32,859,277-32,862,041 | - | C1H3g30697 | C2H3g27419 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| CX3g025236 | 3:32,864,064-32,867,407 | - | C1H3g04157 | C2H3g06584 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| CX3g030470 | 3:32,867,057-32,867,257 | + | - | - | - | - | - | Detail |
| CX3g029211 | 3:32,872,120-32,873,541 | + | - | - | LOC_Os03g59940 | Os03g0814200 | - | Detail |
| CX3g031204 | 3:32,881,982-32,886,895 | - | C1H3g04020 | C2H3g22865 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| CX3g029829 | 3:32,889,850-32,894,250 | - | C1H3g13920 | C2H3g23885 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| CX3g026451 | 3:32,900,598-32,901,248 | + | - | - | LOC_Os03g55810 | Os03g0743650 | - | Detail |
| CX3g029998 | 3:32,910,327-32,912,865 | + | C1H3g00003 | C2H3g18445 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| CX3g025495 | 3:32,914,589-32,916,345 | - | C1H3g05358 | C2H3g22112 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| CX3g028475 | 3:32,918,421-32,919,779 | - | C1H3g18020 | C2H3g14550 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| CX3g027527 | 3:32,921,995-32,925,524 | + | C1H3g24850 | C2H3g06127 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| CX3g028344 | 3:32,926,171-32,928,530 | - | C1H3g01007 | C2H3g01988 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| CX3g025686 | 3:32,928,877-32,930,405 | + | C1H3g21046 | C2H3g11755 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| CX3g027867 | 3:32,931,099-32,936,673 | - | C1H3g08743 | C2H3g01237 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| CX3g030484 | 3:32,937,783-32,944,718 | + | C1H3g28947 | C2H3g27702 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| CX3g029476 | 3:32,946,748-32,949,689 | + | C1H3g22971 | C2H3g20877 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| CX3g026603 | 3:32,951,693-32,953,293 | + | C1H3g08128 | C2H3g21220 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |