| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20866 | 4:26,990,086-26,990,352 | + | C1H4g28262 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C2H4g09538 | 4:26,991,360-26,995,438 | - | C1H4g01403 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C2H4g06850 | 4:26,997,594-26,998,676 | + | C1H4g16234 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C2H4g10397 | 4:26,999,867-27,004,023 | - | C1H4g28199 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C2H4g19624 | 4:27,013,456-27,014,478 | - | - | - | LOC_Os04g52800 | Os04g0618950 | - | Detail |
| C2H4g00816 | 4:27,019,472-27,022,555 | - | C1H4g22303 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C2H4g22466 | 4:27,026,632-27,028,484 | + | - | CX4g034825 | - | - | - | Detail |
| C2H4g08987 | 4:27,028,967-27,029,331 | + | C1H4g06933 | CX4g032452 | - | - | - | Detail |
| C2H4g28780 | 4:27,037,962-27,041,128 | + | C1H4g18636 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C2H4g02197 | 4:27,042,195-27,045,554 | - | C1H4g13931 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C2H4g23444 | 4:27,051,632-27,054,535 | + | C1H4g15202 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C2H4g18841 | 4:27,056,658-27,059,192 | - | C1H4g24641 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C2H4g25907 | 4:27,063,020-27,066,257 | - | C1H4g04907 | - | - | - | - | Detail |
| C2H4g02631 | 4:27,069,306-27,070,566 | + | - | - | LOC_Os04g52880 | Os04g0619800 | - | Detail |
| C2H4g06612 | 4:27,079,390-27,084,156 | + | C1H4g18235 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C2H4g03746 | 4:27,084,868-27,097,303 | - | C1H4g18046 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C2H4g26107 | 4:27,101,123-27,101,539 | - | - | - | LOC_Os04g52910 | - | - | Detail |
| C2H4g21419 | 4:27,104,775-27,105,700 | + | - | - | - | - | - | Detail |
| C2H4g02835 | 4:27,106,476-27,108,281 | + | C1H4g11396 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C2H4g19928 | 4:27,114,110-27,124,400 | + | C1H4g24139 | CX4g032286 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027959 | 3:32,624,625-32,626,010 | + | C1H3g31529 | C2H3g15596 | LOC_Os03g61829 | Os03g0834050 | OsHAD1 | Detail |
| CX3g029113 | 3:32,627,723-32,629,687 | - | C1H3g22428 | C2H3g11398 | LOC_Os03g61840 | Os03g0295300 | - | Detail |
| CX3g028534 | 3:32,633,311-32,636,913 | + | C1H3g14322 | C2H3g11446 | LOC_Os03g61890 | Os03g0835100 | - | Detail |
| CX3g027764 | 3:32,639,831-32,640,055 | - | - | - | LOC_Os03g61900 | Os03g0835150 | - | Detail |
| CX3g029138 | 3:32,645,002-32,645,256 | - | - | - | - | Os03g0835300 | - | Detail |
| CX3g026121 | 3:32,645,306-32,648,308 | + | C1H3g03072 | C2H3g28021 | LOC_Os03g61920 | Os03g0835400 | - | Detail |
| CX3g025800 | 3:32,648,916-32,655,388 | - | C1H3g01425 | C2H3g05961 | LOC_Os03g61930 | Os03g0835600 | - | Detail |
| CX3g025270 | 3:32,656,674-32,657,191 | - | C1H3g31427 | - | LOC_Os03g61940 | Os03g0835700 | - | Detail |
| CX3g026666 | 3:32,658,148-32,662,824 | + | C1H3g11697 | C2H3g09738 | LOC_Os03g61950 | Os03g0835800 | GPA3 | Detail |
| CX3g029438 | 3:32,666,461-32,666,922 | + | C1H3g21220 | C2H3g22082 | LOC_Os03g61960 | Os03g0835900 | - | Detail |
| CX3g027328 | 3:32,668,723-32,672,315 | - | C1H3g16687 | C2H3g02537 | LOC_Os03g61970 | Os03g0836000 | - | Detail |
| CX3g025105 | 3:32,674,895-32,677,203 | + | C1H3g24245 | C2H3g00553 | LOC_Os03g61980 | Os03g0248300 | - | Detail |
| CX3g025476 | 3:32,678,578-32,679,749 | - | C1H3g15438 | C2H3g22451 | LOC_Os03g61990 | Os03g0836200 | - | Detail |
| CX3g026787 | 3:32,684,454-32,685,092 | + | - | - | LOC_Os03g62010 | Os03g0836300 | - | Detail |
| CX3g026790 | 3:32,687,346-32,687,975 | + | - | - | LOC_Os03g62020 | Os03g0836400 | - | Detail |
| CX3g028617 | 3:32,689,201-32,690,408 | - | C1H3g19672 | C2H3g24609 | LOC_Os03g62030 | Os03g0836500 | - | Detail |
| CX3g026385 | 3:32,699,442-32,702,179 | + | C1H3g28661 | C2H3g14006 | LOC_Os03g62060 | Os03g0836800 | OsAH6 | Detail |
| CX3g028024 | 3:32,702,892-32,707,884 | - | C1H3g07688 | C2H3g05839 | LOC_Os03g62080 | Os03g0837000 | - | Detail |
| CX3g029422 | 3:32,711,532-32,716,625 | + | C1H3g22493 | C2H3g09641 | LOC_Os03g62090 | Os03g0837100 | - | Detail |
| CX3g030206 | 3:32,726,607-32,732,181 | + | C1H3g11581 | C2H3g09352 | LOC_Os03g62110 | Os04g0429800 | - | Detail |