| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g09801 | 12:21,827,237-21,833,550 | - | C1H12g30446 | CX12g015068 | LOC_Os12g41860 | Os12g0612700 | HOX33, Oshox33, OsHox33, OSHB3, SIP22 | Detail |
| C2H12g16409 | 12:21,853,021-21,855,610 | - | C1H12g15166 | CX12g016296 | LOC_Os12g41880 | Os12g0613000 | OsNF-YA9, HAP2B | Detail |
| C2H12g23350 | 12:21,863,210-21,866,623 | - | C1H12g18689 | CX12g015834 | LOC_Os12g41890 | Os12g0613100 | - | Detail |
| C2H12g07115 | 12:21,869,810-21,878,465 | - | C1H12g03545 | CX12g015458 | LOC_Os12g41900 | Os12g0613200 | - | Detail |
| C2H12g16250 | 12:21,880,222-21,885,390 | - | C1H12g27977 | CX12g017712 | LOC_Os12g41910 | Os12g0613250 | - | Detail |
| C2H12g14082 | 12:21,886,979-21,890,466 | - | C1H12g07619 | CX12g017601 | LOC_Os12g41920 | Os12g0613300 | - | Detail |
| C2H12g28184 | 12:21,893,696-21,896,522 | + | C1H12g09933 | CX12g015124 | LOC_Os12g41930 | Os12g0613500 | - | Detail |
| C2H12g06308 | 12:21,902,684-21,905,441 | + | C1H12g00573 | CX12g017477 | LOC_Os12g41940 | Os12g0613600 | - | Detail |
| C2H12g17629 | 12:21,906,181-21,912,213 | - | C1H12g26381 | CX12g015895 | LOC_Os12g41950 | Os12g0613700 | - | Detail |
| C2H12g16140 | 12:21,919,582-21,923,609 | + | C1H12g30792 | CX12g017805 | LOC_Os12g41956 | Os12g0613850 | - | Detail |
| C2H12g29571 | 12:21,926,478-21,927,833 | + | C1H12g18392 | CX12g016006 | LOC_Os12g41962 | Os12g0614000 | - | Detail |
| C2H12g03202 | 12:21,931,057-21,932,190 | - | C1H12g31715 | - | LOC_Os12g41970 | Os12g0614100 | - | Detail |
| C2H12g06671 | 12:21,951,823-21,953,148 | - | C1H12g31715 | - | LOC_Os12g41970 | Os12g0614100 | - | Detail |
| C2H12g27495 | 12:21,975,173-21,976,633 | + | C1H12g19557 | CX12g018662 | LOC_Os12g42020 | Os12g0614600 | OsPID | Detail |
| C2H12g11729 | 12:21,980,662-21,981,056 | - | C1H12g25115 | - | - | - | - | Detail |
| C2H12g28277 | 12:21,997,182-21,998,117 | + | C1H12g00787 | CX12g018590 | LOC_Os12g42040 | Os12g0614800 | - | Detail |
| C2H12g19188 | 12:21,998,929-22,000,053 | + | C1H12g00787 | CX12g018590 | LOC_Os12g42040 | Os12g0614851 | - | Detail |
| C2H12g27121 | 12:22,009,318-22,014,447 | - | C1H12g24806 | - | - | - | - | Detail |
| C2H12g11390 | 12:22,010,442-22,013,265 | + | C1H12g12175 | CX12g015873 | LOC_Os12g42070 | Os12g0615000 | - | Detail |
| C2H12g17411 | 12:22,015,032-22,016,676 | + | C1H12g00787 | CX12g017642 | LOC_Os12g42060 | Os12g0615100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027959 | 3:32,624,625-32,626,010 | + | C1H3g31529 | C2H3g15596 | LOC_Os03g61829 | Os03g0834050 | OsHAD1 | Detail |
| CX3g029113 | 3:32,627,723-32,629,687 | - | C1H3g22428 | C2H3g11398 | LOC_Os03g61840 | Os03g0295300 | - | Detail |
| CX3g028534 | 3:32,633,311-32,636,913 | + | C1H3g14322 | C2H3g11446 | LOC_Os03g61890 | Os03g0835100 | - | Detail |
| CX3g027764 | 3:32,639,831-32,640,055 | - | - | - | LOC_Os03g61900 | Os03g0835150 | - | Detail |
| CX3g029138 | 3:32,645,002-32,645,256 | - | - | - | - | Os03g0835300 | - | Detail |
| CX3g026121 | 3:32,645,306-32,648,308 | + | C1H3g03072 | C2H3g28021 | LOC_Os03g61920 | Os03g0835400 | - | Detail |
| CX3g025800 | 3:32,648,916-32,655,388 | - | C1H3g01425 | C2H3g05961 | LOC_Os03g61930 | Os03g0835600 | - | Detail |
| CX3g025270 | 3:32,656,674-32,657,191 | - | C1H3g31427 | - | LOC_Os03g61940 | Os03g0835700 | - | Detail |
| CX3g026666 | 3:32,658,148-32,662,824 | + | C1H3g11697 | C2H3g09738 | LOC_Os03g61950 | Os03g0835800 | GPA3 | Detail |
| CX3g029438 | 3:32,666,461-32,666,922 | + | C1H3g21220 | C2H3g22082 | LOC_Os03g61960 | Os03g0835900 | - | Detail |
| CX3g027328 | 3:32,668,723-32,672,315 | - | C1H3g16687 | C2H3g02537 | LOC_Os03g61970 | Os03g0836000 | - | Detail |
| CX3g025105 | 3:32,674,895-32,677,203 | + | C1H3g24245 | C2H3g00553 | LOC_Os03g61980 | Os03g0248300 | - | Detail |
| CX3g025476 | 3:32,678,578-32,679,749 | - | C1H3g15438 | C2H3g22451 | LOC_Os03g61990 | Os03g0836200 | - | Detail |
| CX3g026787 | 3:32,684,454-32,685,092 | + | - | - | LOC_Os03g62010 | Os03g0836300 | - | Detail |
| CX3g026790 | 3:32,687,346-32,687,975 | + | - | - | LOC_Os03g62020 | Os03g0836400 | - | Detail |
| CX3g028617 | 3:32,689,201-32,690,408 | - | C1H3g19672 | C2H3g24609 | LOC_Os03g62030 | Os03g0836500 | - | Detail |
| CX3g026385 | 3:32,699,442-32,702,179 | + | C1H3g28661 | C2H3g14006 | LOC_Os03g62060 | Os03g0836800 | OsAH6 | Detail |
| CX3g028024 | 3:32,702,892-32,707,884 | - | C1H3g07688 | C2H3g05839 | LOC_Os03g62080 | Os03g0837000 | - | Detail |
| CX3g029422 | 3:32,711,532-32,716,625 | + | C1H3g22493 | C2H3g09641 | LOC_Os03g62090 | Os03g0837100 | - | Detail |
| CX3g030206 | 3:32,726,607-32,732,181 | + | C1H3g11581 | C2H3g09352 | LOC_Os03g62110 | Os04g0429800 | - | Detail |