| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25868 | 4:27,028,064-27,031,267 | + | C2H4g14538 | CX4g032554 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| C1H4g13224 | 4:27,033,552-27,036,319 | - | C2H4g16426 | CX4g033530 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| C1H4g01801 | 4:27,037,337-27,041,771 | - | C2H4g12813 | CX4g033988 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| C1H4g11906 | 4:27,042,573-27,044,494 | + | C2H4g02435 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C1H4g23783 | 4:27,045,459-27,047,091 | + | C2H4g02435 | CX4g035778 | LOC_Os04g52361 | Os04g0613600 | - | Detail |
| C1H4g03528 | 4:27,048,147-27,052,611 | - | C2H4g14262 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C1H4g12683 | 4:27,058,517-27,064,454 | - | C2H4g30596 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C1H4g15444 | 4:27,067,771-27,072,901 | - | C2H4g10814 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C1H4g09621 | 4:27,078,784-27,081,225 | + | C2H4g02940 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C1H4g18002 | 4:27,082,871-27,084,273 | + | C2H4g14823 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C1H4g00068 | 4:27,086,714-27,090,608 | + | C2H4g28997 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C1H4g05036 | 4:27,094,625-27,096,302 | + | C2H4g06699 | CX4g031526 | LOC_Os04g52660 | Os04g0614300 | - | Detail |
| C1H4g02712 | 4:27,100,763-27,106,548 | + | C2H4g17218 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C1H4g17515 | 4:27,111,400-27,120,369 | + | C2H4g10708 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C1H4g07167 | 4:27,132,062-27,132,244 | + | - | - | - | - | - | Detail |
| C1H4g20369 | 4:27,132,485-27,137,405 | + | C2H4g23243 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C1H4g29702 | 4:27,138,169-27,142,624 | + | C2H4g24013 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C1H4g06180 | 4:27,143,216-27,143,900 | - | C2H4g04550 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C1H4g16195 | 4:27,146,332-27,149,911 | + | C2H4g11553 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C1H4g22078 | 4:27,150,667-27,151,792 | + | C2H4g12331 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026728 | 3:32,356,336-32,359,487 | - | C1H3g20175 | C2H3g01649 | LOC_Os03g61210 | Os03g0827600 | - | Detail |
| CX3g028357 | 3:32,363,352-32,369,275 | + | C1H3g27004 | C2H3g01744 | LOC_Os03g61220 | Os03g0827700 | - | Detail |
| CX3g027902 | 3:32,376,254-32,376,631 | + | - | - | LOC_Os03g61240 | Os03g0827900 | - | Detail |
| CX3g027932 | 3:32,383,965-32,386,358 | - | C1H3g22127 | C2H3g10218 | LOC_Os03g61310 | Os03g0828800 | SDRLK-60 | Detail |
| CX3g026752 | 3:32,388,276-32,392,769 | - | C1H3g05040 | C2H3g15439 | LOC_Os03g61290 | Os03g0828600 | - | Detail |
| CX3g028380 | 3:32,395,025-32,396,533 | - | C1H3g03156 | C2H3g19505 | LOC_Os03g61280 | Os03g0828500 | - | Detail |
| CX3g030607 | 3:32,411,241-32,412,871 | - | C1H3g12556 | C2H3g03283 | LOC_Os03g61270 | Os03g0828300 | - | Detail |
| CX3g029024 | 3:32,418,419-32,419,966 | - | C1H3g04822 | C2H3g18546 | LOC_Os03g61260 | Os03g0828100 | OsPRPL18 | Detail |
| CX3g026632 | 3:32,423,654-32,426,283 | - | C1H3g26131 | C2H3g08381 | LOC_Os03g61330 | Os03g0829000 | - | Detail |
| CX3g028011 | 3:32,426,890-32,429,475 | - | C1H3g15915 | C2H3g25590 | LOC_Os03g61340 | Os03g0829100 | - | Detail |
| CX3g026642 | 3:32,430,260-32,433,448 | - | C1H3g03162 | C2H3g24696 | LOC_Os03g61360 | Os03g0829200 | - | Detail |
| CX3g026288 | 3:32,435,523-32,436,173 | - | - | - | LOC_Os03g61410 | Os03g0829600 | - | Detail |
| CX3g025854 | 3:32,457,896-32,458,559 | - | C1H3g23073 | C2H3g26647 | LOC_Os03g61500 | Os03g0830400 | - | Detail |
| CX3g026702 | 3:32,470,794-32,471,321 | - | - | - | LOC_Os03g61510 | Os03g0830600 | OsPMEI15 | Detail |
| CX3g029618 | 3:32,472,477-32,477,665 | - | C1H3g03284 | C2H3g06697 | LOC_Os03g61540 | Os03g0830900 | - | Detail |
| CX3g028759 | 3:32,481,967-32,483,168 | + | C1H3g14942 | C2H3g08869 | LOC_Os03g61550 | Os03g0831000 | - | Detail |
| CX3g026737 | 3:32,483,734-32,488,801 | - | C1H3g25915 | C2H3g09913 | LOC_Os03g61560 | Os03g0831100 | - | Detail |
| CX3g028619 | 3:32,490,682-32,491,309 | + | C1H3g22820 | C2H3g11440 | LOC_Os03g61570 | Os03g0831200 | GATA12 | Detail |
| CX3g030545 | 3:32,495,573-32,499,083 | + | C1H3g04867 | C2H3g03666 | LOC_Os03g61580 | Os03g0831300 | - | Detail |
| CX3g025585 | 3:32,500,459-32,500,683 | + | C1H3g01186 | C2H3g22160 | LOC_Os03g61590 | Os03g0831400 | - | Detail |