| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20996 | 4:30,225,879-30,227,521 | - | C1H4g05282 | CX4g034879 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| C2H4g00697 | 4:30,232,390-30,237,758 | + | C1H4g17079 | CX4g033496 | LOC_Os04g58720 | Os04g0683800 | OsFTIP6 | Detail |
| C2H4g01840 | 4:30,237,886-30,240,588 | - | C1H4g07968 | CX4g032610 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| C2H4g26858 | 4:30,256,940-30,263,782 | + | C1H4g20128 | CX4g033459 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| C2H4g01802 | 4:30,264,613-30,265,466 | + | C1H4g02282 | CX4g033405 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| C2H4g02516 | 4:30,268,563-30,279,634 | + | C1H4g18219 | CX4g031834 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| C2H4g13202 | 4:30,280,251-30,280,496 | + | - | CX4g033329 | LOC_Os04g58790 | Os04g0684600 | - | Detail |
| C2H4g22761 | 4:30,283,690-30,285,252 | + | C1H4g26669 | CX4g033643 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| C2H4g01080 | 4:30,288,522-30,289,517 | + | - | CX4g034684 | LOC_Os04g58810 | Os04g0684900 | OsCAF1B, OsCAF1B(L), OsCAF1-5 | Detail |
| C2H4g29352 | 4:30,296,915-30,297,646 | + | - | CX4g032372 | LOC_Os04g58820 | Os04g0685000 | - | Detail |
| C2H4g17883 | 4:30,300,119-30,302,518 | - | C1H4g14195 | CX4g035667 | LOC_Os04g58830 | Os04g0685100 | - | Detail |
| C2H4g29963 | 4:30,304,800-30,306,281 | + | - | CX4g035231 | LOC_Os04g58840 | Os04g0685200 | - | Detail |
| C2H4g08586 | 4:30,310,521-30,311,138 | - | C1H4g00056 | CX4g035928 | LOC_Os04g58850 | Os04g0685300 | OsHin1 | Detail |
| C2H4g17212 | 4:30,315,783-30,316,445 | - | - | CX4g035805 | LOC_Os04g58860 | Os04g0685400 | - | Detail |
| C2H4g10173 | 4:30,321,505-30,324,811 | - | C1H4g22677 | CX4g034074 | LOC_Os04g58870 | Os04g0685500 | - | Detail |
| C2H4g09863 | 4:30,328,518-30,334,739 | - | C1H4g12841 | CX4g034074 | LOC_Os04g58880 | Os04g0685600 | OsEXO70A1, RLS2 | Detail |
| C2H4g05485 | 4:30,338,214-30,339,059 | - | - | CX4g035539 | LOC_Os04g58890 | Os04g0685700 | - | Detail |
| C2H4g05284 | 4:30,341,417-30,344,361 | + | C1H4g24643 | CX4g035298 | LOC_Os04g58900 | Os04g0685800 | - | Detail |
| C2H4g20145 | 4:30,346,745-30,350,657 | - | C1H4g30748 | CX4g033134 | LOC_Os04g58910 | Os04g0685900 | - | Detail |
| C2H4g20450 | 4:30,359,547-30,360,785 | - | - | - | LOC_Os04g58920 | Os04g0686000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026510 | 3:32,276,700-32,278,562 | + | C1H3g13397 | C2H3g12188 | LOC_Os03g61030 | Os03g0825500 | - | Detail |
| CX3g029944 | 3:32,280,573-32,282,039 | - | - | - | LOC_Os03g61040 | Os03g0825600 | - | Detail |
| CX3g031039 | 3:32,287,889-32,295,463 | + | C1H3g30577 | C2H3g22286 | LOC_Os03g61050 | Os03g0825700 | Os DEX1, OsDEX1 | Detail |
| CX3g027996 | 3:32,296,357-32,298,409 | - | C1H3g02346 | C2H3g05833 | LOC_Os03g61060 | Os03g0825800 | - | Detail |
| CX3g027142 | 3:32,302,385-32,303,634 | - | - | - | LOC_Os03g61070 | Os03g0825900 | - | Detail |
| CX3g030278 | 3:32,305,299-32,306,372 | - | - | - | LOC_Os03g27540 | Os03g0564800 | - | Detail |
| CX3g025859 | 3:32,307,016-32,307,501 | + | - | - | - | - | - | Detail |
| CX3g030000 | 3:32,308,455-32,309,707 | - | C1H3g31357 | C2H3g19485 | - | - | - | Detail |
| CX3g025633 | 3:32,310,294-32,310,647 | + | - | - | - | - | - | Detail |
| CX3g030592 | 3:32,312,115-32,315,632 | - | C1H3g07590 | C2H3g07911 | LOC_Os03g61080 | Os03g0826000 | - | Detail |
| CX3g030265 | 3:32,319,241-32,321,857 | - | C1H3g21357 | C2H3g28509 | LOC_Os03g61100 | Os03g0826300 | - | Detail |
| CX3g025977 | 3:32,324,116-32,326,029 | + | C1H3g28916 | C2H3g11545 | LOC_Os03g61110 | Os03g0826400 | - | Detail |
| CX3g029605 | 3:32,326,924-32,331,846 | - | C1H3g22562 | C2H3g21893 | LOC_Os03g61120 | Os03g0826500 | OASA1 | Detail |
| CX3g025000 | 3:32,334,464-32,336,886 | + | C1H3g26880 | C2H3g05353 | LOC_Os03g61130 | Os03g0826600 | NPC1, OsNPC1 | Detail |
| CX3g028046 | 3:32,338,203-32,341,151 | - | C1H3g05534 | C2H3g28499 | LOC_Os03g61140 | Os03g0826700 | - | Detail |
| CX3g028016 | 3:32,342,758-32,343,482 | - | C1H3g12263 | C2H3g14501 | LOC_Os03g61160 | Os03g0826800 | - | Detail |
| CX3g027714 | 3:32,347,682-32,348,668 | - | C1H3g01008 | C2H3g13944 | LOC_Os03g61160 | Os03g0826900 | - | Detail |
| CX3g030709 | 3:32,349,429-32,351,269 | - | C1H3g19796 | C2H3g17363 | - | - | - | Detail |
| CX3g028019 | 3:32,349,697-32,350,508 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g026377 | 3:32,353,066-32,355,391 | + | C1H3g22721 | C2H3g26774 | LOC_Os03g61200 | Os03g0827500 | - | Detail |