| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01651 | 1:19,206,210-19,207,044 | + | C1H1g29224 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C2H1g18000 | 1:19,208,125-19,208,987 | - | C1H1g31306 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C2H1g11282 | 1:19,219,443-19,220,061 | - | C1H1g07257 | CX1g004093 | - | Os01g0762000 | - | Detail |
| C2H1g18173 | 1:19,246,906-19,248,195 | - | C1H1g05766 | - | LOC_Os01g38090 | Os01g0562600 | - | Detail |
| C2H1g08899 | 1:19,248,870-19,258,147 | + | C1H1g14910 | - | LOC_Os01g38130 | Os01g0562400 | - | Detail |
| C2H1g03153 | 1:19,265,312-19,266,658 | - | C1H1g17141 | - | LOC_Os01g38430 | Os01g0562600 | - | Detail |
| C2H1g24757 | 1:19,271,352-19,274,583 | + | C1H1g25180 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C2H1g25581 | 1:19,278,536-19,281,426 | - | C1H1g26653 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C2H1g19973 | 1:19,283,653-19,285,365 | - | C1H1g06422 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C2H1g30274 | 1:19,291,865-19,297,892 | - | C1H1g16023 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C2H1g05106 | 1:19,307,462-19,310,165 | - | C1H1g13897 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| C2H1g12854 | 1:19,341,446-19,346,845 | - | C1H1g22416 | CX1g003127 | LOC_Os01g38620 | Os01g0566900 | - | Detail |
| C2H1g22209 | 1:19,360,865-19,362,875 | + | C1H1g20878 | CX1g006382 | LOC_Os01g38670 | Os01g0567500 | OsMST8 | Detail |
| C2H1g08093 | 1:19,364,872-19,366,736 | - | C1H1g27966 | CX1g003104 | LOC_Os01g38680 | Os01g0567600 | OsMST7, OsSTP7 | Detail |
| C2H1g28975 | 1:19,395,895-19,401,543 | - | C1H1g10384 | CX1g002815 | LOC_Os01g38850 | Os01g0568400 | Gnk2RLK-3 | Detail |
| C2H1g22055 | 1:19,415,858-19,419,271 | + | C1H1g11385 | CX1g006699 | LOC_Os01g38880 | Os01g0569200 | - | Detail |
| C2H1g20871 | 1:19,426,933-19,427,151 | + | C1H1g23492 | - | - | - | - | Detail |
| C2H1g08516 | 1:19,442,108-19,450,861 | - | C1H1g16258 | CX1g007140 | LOC_Os01g38910 | Os01g0568800 | Gnk2-K1 | Detail |
| C2H1g24947 | 1:19,480,533-19,485,734 | + | C1H1g21031 | CX1g005732 | LOC_Os01g38950 | Os01g0570500 | - | Detail |
| C2H1g24876 | 1:19,488,660-19,489,562 | - | C1H1g03105 | CX1g006869 | LOC_Os01g38960 | Os01g0570601 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026510 | 3:32,276,700-32,278,562 | + | C1H3g13397 | C2H3g12188 | LOC_Os03g61030 | Os03g0825500 | - | Detail |
| CX3g029944 | 3:32,280,573-32,282,039 | - | - | - | LOC_Os03g61040 | Os03g0825600 | - | Detail |
| CX3g031039 | 3:32,287,889-32,295,463 | + | C1H3g30577 | C2H3g22286 | LOC_Os03g61050 | Os03g0825700 | Os DEX1, OsDEX1 | Detail |
| CX3g027996 | 3:32,296,357-32,298,409 | - | C1H3g02346 | C2H3g05833 | LOC_Os03g61060 | Os03g0825800 | - | Detail |
| CX3g027142 | 3:32,302,385-32,303,634 | - | - | - | LOC_Os03g61070 | Os03g0825900 | - | Detail |
| CX3g030278 | 3:32,305,299-32,306,372 | - | - | - | LOC_Os03g27540 | Os03g0564800 | - | Detail |
| CX3g025859 | 3:32,307,016-32,307,501 | + | - | - | - | - | - | Detail |
| CX3g030000 | 3:32,308,455-32,309,707 | - | C1H3g31357 | C2H3g19485 | - | - | - | Detail |
| CX3g025633 | 3:32,310,294-32,310,647 | + | - | - | - | - | - | Detail |
| CX3g030592 | 3:32,312,115-32,315,632 | - | C1H3g07590 | C2H3g07911 | LOC_Os03g61080 | Os03g0826000 | - | Detail |
| CX3g030265 | 3:32,319,241-32,321,857 | - | C1H3g21357 | C2H3g28509 | LOC_Os03g61100 | Os03g0826300 | - | Detail |
| CX3g025977 | 3:32,324,116-32,326,029 | + | C1H3g28916 | C2H3g11545 | LOC_Os03g61110 | Os03g0826400 | - | Detail |
| CX3g029605 | 3:32,326,924-32,331,846 | - | C1H3g22562 | C2H3g21893 | LOC_Os03g61120 | Os03g0826500 | OASA1 | Detail |
| CX3g025000 | 3:32,334,464-32,336,886 | + | C1H3g26880 | C2H3g05353 | LOC_Os03g61130 | Os03g0826600 | NPC1, OsNPC1 | Detail |
| CX3g028046 | 3:32,338,203-32,341,151 | - | C1H3g05534 | C2H3g28499 | LOC_Os03g61140 | Os03g0826700 | - | Detail |
| CX3g028016 | 3:32,342,758-32,343,482 | - | C1H3g12263 | C2H3g14501 | LOC_Os03g61160 | Os03g0826800 | - | Detail |
| CX3g027714 | 3:32,347,682-32,348,668 | - | C1H3g01008 | C2H3g13944 | LOC_Os03g61160 | Os03g0826900 | - | Detail |
| CX3g030709 | 3:32,349,429-32,351,269 | - | C1H3g19796 | C2H3g17363 | - | - | - | Detail |
| CX3g028019 | 3:32,349,697-32,350,508 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g026377 | 3:32,353,066-32,355,391 | + | C1H3g22721 | C2H3g26774 | LOC_Os03g61200 | Os03g0827500 | - | Detail |