| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30367 | 1:37,117,906-37,120,719 | + | C2H3g08891 | CX1g001289 | - | - | - | Detail |
| C1H1g13183 | 1:37,121,582-37,122,052 | - | C2H1g09890 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| C1H1g26489 | 1:37,121,617-37,127,831 | + | C2H1g20439 | CX1g006637 | LOC_Os01g72210 | Os01g0950900 | - | Detail |
| C1H1g26405 | 1:37,126,345-37,133,241 | - | C2H1g27207 | CX1g001273 | LOC_Os01g72220 | Os01g0951000 | OsFY | Detail |
| C1H1g21234 | 1:37,135,362-37,138,578 | + | C2H1g23592 | CX1g004320 | LOC_Os01g72230 | Os01g0951100 | - | Detail |
| C1H1g03325 | 1:37,139,935-37,147,511 | + | C2H1g09816 | CX1g004161 | LOC_Os01g72240 | Os01g0951200 | - | Detail |
| C1H1g25508 | 1:37,148,245-37,149,867 | - | C2H1g26033 | CX1g005013 | LOC_Os01g72260 | Os01g0951500 | CYP94E2, OsCYP94E2 | Detail |
| C1H1g24604 | 1:37,155,802-37,158,937 | - | C2H1g09971 | CX1g006323 | LOC_Os01g72280 | Os01g0951800 | - | Detail |
| C1H1g13711 | 1:37,165,847-37,167,114 | + | C2H1g11533 | CX1g003867 | LOC_Os01g72290 | Os01g0952000 | - | Detail |
| C1H1g12927 | 1:37,172,409-37,173,548 | + | C2H1g04145 | CX1g000435 | LOC_Os01g72300 | Os01g0952100 | - | Detail |
| C1H1g25821 | 1:37,174,340-37,179,867 | + | C2H1g17493 | CX1g001457 | LOC_Os01g72310 | Os01g0952200 | - | Detail |
| C1H1g12568 | 1:37,180,233-37,187,553 | - | C2H1g24796 | CX1g004562 | LOC_Os01g72320 | Os01g0952300 | - | Detail |
| C1H1g26383 | 1:37,204,253-37,206,559 | + | C2H1g17242 | CX1g002915 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| C1H1g28344 | 1:37,209,200-37,217,312 | + | C2H1g15970 | CX1g006787 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| C1H1g14812 | 1:37,220,453-37,226,469 | + | C2H1g26616 | CX1g000308 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| C1H1g24549 | 1:37,228,408-37,229,073 | + | - | CX1g004115 | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| C1H1g10733 | 1:37,230,068-37,233,918 | - | C2H1g27034 | CX1g006331 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| C1H1g18549 | 1:37,237,551-37,239,692 | + | C2H1g16159 | CX1g002462 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| C1H1g01146 | 1:37,241,007-37,242,509 | - | C2H1g14926 | CX1g001591 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| C1H1g04628 | 1:37,247,452-37,249,749 | - | C2H1g03834 | CX1g003263 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026510 | 3:32,276,700-32,278,562 | + | C1H3g13397 | C2H3g12188 | LOC_Os03g61030 | Os03g0825500 | - | Detail |
| CX3g029944 | 3:32,280,573-32,282,039 | - | - | - | LOC_Os03g61040 | Os03g0825600 | - | Detail |
| CX3g031039 | 3:32,287,889-32,295,463 | + | C1H3g30577 | C2H3g22286 | LOC_Os03g61050 | Os03g0825700 | Os DEX1, OsDEX1 | Detail |
| CX3g027996 | 3:32,296,357-32,298,409 | - | C1H3g02346 | C2H3g05833 | LOC_Os03g61060 | Os03g0825800 | - | Detail |
| CX3g027142 | 3:32,302,385-32,303,634 | - | - | - | LOC_Os03g61070 | Os03g0825900 | - | Detail |
| CX3g030278 | 3:32,305,299-32,306,372 | - | - | - | LOC_Os03g27540 | Os03g0564800 | - | Detail |
| CX3g025859 | 3:32,307,016-32,307,501 | + | - | - | - | - | - | Detail |
| CX3g030000 | 3:32,308,455-32,309,707 | - | C1H3g31357 | C2H3g19485 | - | - | - | Detail |
| CX3g025633 | 3:32,310,294-32,310,647 | + | - | - | - | - | - | Detail |
| CX3g030592 | 3:32,312,115-32,315,632 | - | C1H3g07590 | C2H3g07911 | LOC_Os03g61080 | Os03g0826000 | - | Detail |
| CX3g030265 | 3:32,319,241-32,321,857 | - | C1H3g21357 | C2H3g28509 | LOC_Os03g61100 | Os03g0826300 | - | Detail |
| CX3g025977 | 3:32,324,116-32,326,029 | + | C1H3g28916 | C2H3g11545 | LOC_Os03g61110 | Os03g0826400 | - | Detail |
| CX3g029605 | 3:32,326,924-32,331,846 | - | C1H3g22562 | C2H3g21893 | LOC_Os03g61120 | Os03g0826500 | OASA1 | Detail |
| CX3g025000 | 3:32,334,464-32,336,886 | + | C1H3g26880 | C2H3g05353 | LOC_Os03g61130 | Os03g0826600 | NPC1, OsNPC1 | Detail |
| CX3g028046 | 3:32,338,203-32,341,151 | - | C1H3g05534 | C2H3g28499 | LOC_Os03g61140 | Os03g0826700 | - | Detail |
| CX3g028016 | 3:32,342,758-32,343,482 | - | C1H3g12263 | C2H3g14501 | LOC_Os03g61160 | Os03g0826800 | - | Detail |
| CX3g027714 | 3:32,347,682-32,348,668 | - | C1H3g01008 | C2H3g13944 | LOC_Os03g61160 | Os03g0826900 | - | Detail |
| CX3g030709 | 3:32,349,429-32,351,269 | - | C1H3g19796 | C2H3g17363 | - | - | - | Detail |
| CX3g028019 | 3:32,349,697-32,350,508 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g026377 | 3:32,353,066-32,355,391 | + | C1H3g22721 | C2H3g26774 | LOC_Os03g61200 | Os03g0827500 | - | Detail |