| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026461 | 3:32,142,712-32,145,319 | + | C1H3g08406 | C2H3g29253 | LOC_Os03g60780 | Os03g0822700 | - | Detail |
| CX3g026368 | 3:32,145,780-32,147,346 | + | C1H3g13457 | C2H3g29318 | LOC_Os03g60790 | Os03g0822800 | - | Detail |
| CX3g025072 | 3:32,148,614-32,151,730 | + | C1H3g01506 | C2H3g15491 | LOC_Os03g60800 | Os03g0822900 | - | Detail |
| CX3g027248 | 3:32,152,826-32,154,937 | - | C1H3g28844 | C2H3g11146 | LOC_Os03g60810 | Os03g0823000 | - | Detail |
| CX3g027087 | 3:32,160,283-32,164,423 | - | C1H3g06740 | C2H3g22473 | LOC_Os03g60820 | Os03g0823100 | OsXTPH1 | Detail |
| CX3g030305 | 3:32,168,945-32,169,439 | - | C1H3g24263 | C2H3g15918 | LOC_Os03g60840 | Os03g0823400 | - | Detail |
| CX3g026712 | 3:32,178,805-32,181,238 | - | C1H3g29645 | C2H3g26506 | LOC_Os03g60850 | Os03g0823500 | - | Detail |
| CX3g026664 | 3:32,195,268-32,197,863 | - | C1H3g11164 | C2H3g00093 | LOC_Os03g60870 | Os03g0823700 | - | Detail |
| CX3g027221 | 3:32,199,664-32,203,008 | - | C1H3g23866 | C2H3g02263 | LOC_Os03g60880 | Os03g0823800 | - | Detail |
| CX3g030885 | 3:32,205,449-32,207,453 | - | C1H3g01074 | C2H3g09474 | LOC_Os03g60890 | Os03g0436300 | - | Detail |
| CX3g029116 | 3:32,209,544-32,209,834 | - | C1H3g01722 | C2H3g20838 | LOC_Os03g60900 | Os03g0824000 | - | Detail |
| CX3g028969 | 3:32,211,834-32,215,652 | - | C1H3g20395 | C2H3g11643 | LOC_Os03g60910 | Os03g0824100 | OspTAC2 | Detail |
| CX3g029964 | 3:32,216,009-32,217,839 | + | C1H3g15763 | C2H3g24839 | LOC_Os03g60920 | Os03g0824200 | - | Detail |
| CX3g026240 | 3:32,219,189-32,226,306 | + | C1H3g22993 | C2H3g29813 | LOC_Os03g60930 | Os03g0824300 | - | Detail |
| CX3g029491 | 3:32,227,036-32,229,108 | + | C1H3g30240 | C2H3g08790 | LOC_Os03g60939 | Os03g0824400 | - | Detail |
| CX3g026521 | 3:32,233,246-32,234,750 | + | C1H3g14797 | C2H3g29419 | LOC_Os03g60960 | Os03g0824600 | - | Detail |
| CX3g026908 | 3:32,241,207-32,241,389 | + | - | - | - | - | - | Detail |
| CX3g028951 | 3:32,250,893-32,251,531 | - | C1H3g07336 | C2H3g22835 | LOC_Os03g60992 | - | - | Detail |
| CX3g028028 | 3:32,268,967-32,273,278 | + | C1H3g10094 | C2H3g07063 | LOC_Os03g61010 | Os03g0825300 | - | Detail |
| CX3g028738 | 3:32,275,136-32,276,274 | - | C1H3g04477 | C2H3g11868 | LOC_Os03g61019 | Os03g0825400 | - | Detail |