| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23223 | 4:28,886,893-28,888,704 | - | C2H4g09445 | CX4g034578 | LOC_Os04g55660 | Os04g0650200 | - | Detail |
| C1H4g17876 | 4:28,890,428-28,893,741 | - | C2H4g25070 | CX4g035022 | LOC_Os04g55670 | Os04g0650300 | OsGT43I | Detail |
| C1H4g20767 | 4:28,902,933-28,905,100 | + | C2H4g30089 | CX4g032417 | LOC_Os04g55690 | Os04g0650500 | - | Detail |
| C1H4g29586 | 4:28,905,682-28,908,672 | - | C2H4g16279 | CX4g034904 | LOC_Os04g55700 | Os04g0650600 | - | Detail |
| C1H4g11243 | 4:28,917,746-28,920,513 | + | C2H4g25286 | CX4g032420 | LOC_Os04g55710 | Os04g0650700 | - | Detail |
| C1H4g03632 | 4:28,923,444-28,926,328 | + | C2H4g06390 | CX4g033907 | LOC_Os04g55720 | Os04g0650800 | - | Detail |
| C1H4g09395 | 4:28,926,645-28,935,930 | - | C2H4g14659 | CX4g033850 | LOC_Os04g55730 | Os04g0650900 | - | Detail |
| C1H4g15692 | 4:28,936,703-28,938,087 | - | C2H4g14244 | CX4g032222 | LOC_Os04g55740 | Os04g0651000 | - | Detail |
| C1H4g22868 | 4:28,955,508-28,956,195 | - | C2H4g04267 | CX4g035054 | LOC_Os04g55770 | Os04g0651600 | - | Detail |
| C1H4g05341 | 4:28,970,679-28,976,005 | - | C2H4g03455 | CX4g033402 | LOC_Os04g55800 | Os04g0652400 | - | Detail |
| C1H4g19231 | 4:28,983,671-28,988,052 | - | C2H4g29917 | CX4g035476 | LOC_Os04g55810 | Os04g0652500 | - | Detail |
| C1H4g21279 | 4:28,989,422-28,995,418 | + | C2H4g13053 | CX4g034733 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| C1H4g27223 | 4:28,997,336-28,997,747 | + | C2H4g17182 | CX4g032019 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| C1H4g01148 | 4:28,998,741-28,999,789 | + | C2H4g24107 | CX4g034882 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| C1H4g09382 | 4:29,001,265-29,003,398 | - | C2H4g15013 | CX4g035227 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| C1H4g27108 | 4:29,020,871-29,025,229 | + | C2H4g11780 | CX4g034020 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| C1H4g20973 | 4:29,025,750-29,027,749 | - | C2H4g28993 | CX4g036062 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| C1H4g27383 | 4:29,029,408-29,033,885 | + | C2H4g12547 | CX4g034519 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| C1H4g14097 | 4:29,040,501-29,040,941 | + | C2H4g01169 | - | LOC_Os04g55950 | Os04g0653300 | - | Detail |
| C1H4g13362 | 4:29,045,146-29,051,205 | + | C2H4g18627 | CX4g033116 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002208 | 1:18,027,550-18,034,661 | - | C1H1g05992 | C2H1g25242 | LOC_Os01g34920 | Os01g0533400 | - | Detail |
| CX1g003265 | 1:18,035,080-18,054,869 | - | C1H1g28507 | C2H1g15042 | LOC_Os01g34930 | Os01g0533500 | - | Detail |
| CX1g004495 | 1:18,075,008-18,083,283 | + | C1H1g10355 | C2H1g12481 | LOC_Os01g34970 | Os01g0533900 | - | Detail |
| CX1g001922 | 1:18,105,919-18,115,913 | + | C1H1g30493 | C2H1g08129 | LOC_Os01g35030 | Os01g0534700 | - | Detail |
| CX1g001748 | 1:18,119,629-18,122,199 | + | C1H1g11430 | C2H1g15432 | LOC_Os01g35040 | Os01g0534800 | - | Detail |
| CX1g003702 | 1:18,126,164-18,134,482 | - | C1H1g16135 | C2H1g00212 | LOC_Os01g35050 | Os01g0534900 | OsOSCA1.1 | Detail |
| CX1g005358 | 1:18,147,951-18,148,754 | - | C1H1g19774 | C2H1g03818 | LOC_Os01g35100 | Os01g0535100 | - | Detail |
| CX1g002608 | 1:18,151,591-18,152,391 | - | C1H1g15244 | C2H1g08171 | LOC_Os01g35120 | Os01g0535300 | - | Detail |
| CX1g000084 | 1:18,154,298-18,158,137 | - | C1H1g28775 | C2H1g10503 | LOC_Os01g35160 | Os01g0535400 | - | Detail |
| CX1g000064 | 1:18,159,706-18,159,879 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002557 | 1:18,164,045-18,166,021 | + | C1H1g17125 | C2H1g18892 | LOC_Os01g35170 | Os01g0535900 | - | Detail |
| CX1g005646 | 1:18,167,892-18,173,498 | - | C1H1g28835 | C2H1g09957 | LOC_Os01g35184 | Os01g0536000 | - | Detail |
| CX1g003966 | 1:18,176,413-18,188,064 | - | C1H1g05453 | C2H1g02620 | LOC_Os01g35230 | Os01g0536400 | - | Detail |
| CX1g006727 | 1:18,226,836-18,229,594 | - | C1H1g16984 | C2H1g09191 | LOC_Os01g34660 | Os01g0541600 | - | Detail |
| CX1g002945 | 1:18,238,253-18,238,438 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g005180 | 1:18,239,370-18,241,176 | + | C1H1g24864 | C2H1g09441 | LOC_Os01g36070 | Os01g0541800 | SWEET2a | Detail |
| CX1g004838 | 1:18,242,757-18,250,454 | - | C1H1g16612 | C2H1g12295 | LOC_Os01g36080 | Os01g0541900 | - | Detail |
| CX1g006291 | 1:18,252,343-18,253,278 | + | - | - | LOC_Os01g36090 | Os01g0542000 | - | Detail |
| CX1g002973 | 1:18,289,909-18,290,217 | - | - | - | - | - | - | Detail |
| CX1g000596 | 1:18,296,564-18,296,944 | - | - | - | - | - | - | Detail |