| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08088 | 1:23,044,591-23,047,367 | + | C1H1g31055 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C2H1g22980 | 1:23,046,848-23,048,906 | - | C1H1g10058 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C2H1g13504 | 1:23,051,648-23,054,849 | - | C1H1g19962 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C2H1g09207 | 1:23,055,650-23,059,742 | + | C1H1g17185 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C2H1g17482 | 1:23,061,086-23,064,129 | + | C1H1g25061 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C2H1g02385 | 1:23,078,541-23,081,482 | - | C1H1g31552 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C2H1g03402 | 1:23,086,625-23,088,923 | + | C1H1g00902 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C2H1g07647 | 1:23,090,833-23,091,147 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642000 | - | Detail |
| C2H1g14331 | 1:23,091,174-23,098,582 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C2H1g23910 | 1:23,098,762-23,099,498 | - | C1H1g06064 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C2H1g05902 | 1:23,132,843-23,134,398 | + | C1H1g02209 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C2H1g10748 | 1:23,134,990-23,137,497 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g09079 | 1:23,137,588-23,138,064 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g05185 | 1:23,155,106-23,159,500 | + | C1H1g21876 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C2H1g02636 | 1:23,170,308-23,173,345 | - | C1H1g25133 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C2H1g17274 | 1:23,188,624-23,193,473 | - | C1H1g17824 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g01755 | 1:23,197,092-23,198,684 | + | C1H1g14596 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C2H1g00660 | 1:23,216,768-23,217,823 | - | C1H1g08154 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C2H1g06994 | 1:23,226,508-23,233,386 | + | C1H1g06404 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C2H1g23683 | 1:23,246,717-23,248,981 | + | C1H1g20018 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028509 | 3:32,016,366-32,016,893 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g60540 | Os03g0279700 | - | Detail |
| CX3g025197 | 3:32,018,450-32,024,468 | + | C1H3g13391 | C2H3g01855 | LOC_Os03g60550 | Os03g0820100 | - | Detail |
| CX3g029993 | 3:32,028,358-32,028,540 | + | - | - | - | - | - | Detail |
| CX3g029515 | 3:32,028,966-32,032,807 | + | C1H3g31889 | C2H3g30643 | LOC_Os03g60560 | Os03g0820300 | ZFP182 | Detail |
| CX3g030735 | 3:32,035,103-32,035,779 | + | C1H3g31889 | C2H3g30643 | LOC_Os03g60580 | Os03g0820500 | OsADF3 | Detail |
| CX3g026527 | 3:32,036,485-32,038,760 | + | C1H3g18878 | C2H3g14030 | LOC_Os03g60580 | Os03g0820600 | - | Detail |
| CX3g029295 | 3:32,040,201-32,042,598 | - | C1H3g26924 | C2H3g06884 | LOC_Os03g60600 | Os03g0820700 | - | Detail |
| CX3g025531 | 3:32,045,708-32,049,206 | - | C1H3g11416 | C2H3g20559 | LOC_Os03g60610 | Os03g0820900 | - | Detail |
| CX3g027512 | 3:32,052,835-32,057,090 | + | C1H3g28279 | C2H3g05607 | LOC_Os03g60620 | Os03g0821100 | - | Detail |
| CX3g030377 | 3:32,062,334-32,063,416 | + | C1H3g25995 | C2H3g25786 | LOC_Os03g60630 | Os03g0821200 | - | Detail |
| CX3g029500 | 3:32,077,904-32,078,237 | - | C1H3g30691 | C2H3g20031 | - | - | - | Detail |
| CX3g027662 | 3:32,080,173-32,083,382 | - | C1H3g24438 | C2H3g23674 | LOC_Os03g60650 | Os03g0821300 | - | Detail |
| CX3g030960 | 3:32,092,687-32,093,010 | + | - | - | - | - | - | Detail |
| CX3g031271 | 3:32,097,381-32,097,797 | + | - | C2H3g24002 | LOC_Os03g60660 | Os03g0821550 | - | Detail |
| CX3g029901 | 3:32,099,075-32,100,316 | - | C1H3g13212 | C2H3g12716 | LOC_Os03g60690 | Os03g0821700 | - | Detail |
| CX3g026762 | 3:32,102,230-32,104,970 | - | C1H3g12541 | C2H3g23136 | LOC_Os03g60700 | Os03g0821800 | - | Detail |
| CX3g029390 | 3:32,109,520-32,113,665 | + | C1H3g00836 | C2H3g16650 | LOC_Os03g60710 | Os03g0821900 | - | Detail |
| CX3g028890 | 3:32,115,277-32,117,492 | - | C1H3g30466 | C2H3g28970 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| CX3g029250 | 3:32,133,859-32,135,491 | - | C1H3g30684 | C2H3g26732 | LOC_Os03g60740 | Os03g0822200 | - | Detail |
| CX3g030322 | 3:32,136,338-32,140,937 | + | C1H3g07533 | C2H3g00930 | LOC_Os03g60760 | Os03g0822400 | - | Detail |