| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g05876 | 9:16,546,373-16,554,002 | + | C1H9g02458 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C2H9g29007 | 9:16,556,529-16,560,311 | + | C1H9g22232 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C2H9g16087 | 9:16,569,730-16,574,485 | + | C1H9g22572 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C2H9g24094 | 9:16,581,754-16,587,842 | + | C1H9g01976 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C2H9g09810 | 9:16,589,996-16,592,464 | + | C1H9g31066 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C2H9g27580 | 9:16,599,465-16,601,679 | + | C1H9g29777 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C2H9g28610 | 9:16,602,742-16,605,103 | - | C1H9g05594 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C2H9g13596 | 9:16,606,738-16,608,087 | - | C1H9g16500 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C2H9g15981 | 9:16,609,762-16,611,896 | - | C1H9g04875 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C2H9g02236 | 9:16,618,886-16,620,798 | - | C1H9g11387 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C2H9g17381 | 9:16,621,727-16,623,599 | - | C1H9g14135 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C2H9g06782 | 9:16,627,182-16,630,912 | - | C1H9g15525 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C2H9g02430 | 9:16,630,958-16,632,727 | - | C1H9g13578 | - | - | - | - | Detail |
| C2H9g07870 | 9:16,635,801-16,636,391 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g16760 | 9:16,636,412-16,637,056 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g21730 | 9:16,649,061-16,660,781 | - | C1H9g22826 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C2H9g10967 | 9:16,673,243-16,674,601 | + | C1H9g05421 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| C2H9g06327 | 9:16,676,674-16,683,065 | + | C1H9g29478 | CX9g057601 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| C2H9g10101 | 9:16,684,349-16,691,879 | + | C1H9g15901 | CX9g058204 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| C2H9g04957 | 9:16,695,642-16,700,718 | + | C1H9g15862 | CX9g055855 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026231 | 3:31,769,479-31,770,081 | + | C1H3g03324 | C2H3g07257 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| CX3g025206 | 3:31,775,440-31,775,748 | - | - | - | - | - | - | Detail |
| CX3g025448 | 3:31,780,825-31,784,002 | - | C1H3g23671 | C2H3g09561 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| CX3g030353 | 3:31,798,223-31,799,299 | + | C1H3g23594 | C2H3g11227 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| CX3g029581 | 3:31,800,505-31,806,275 | - | C1H3g00328 | C2H3g24873 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| CX3g025237 | 3:31,807,606-31,808,813 | + | C1H3g20794 | C2H3g04086 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| CX3g029363 | 3:31,815,608-31,819,259 | + | C1H3g22427 | C2H3g14885 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| CX3g030003 | 3:31,821,776-31,822,522 | - | C1H3g09437 | C2H3g05216 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| CX3g030342 | 3:31,824,483-31,827,206 | - | C1H3g16381 | C2H3g17896 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| CX3g030197 | 3:31,827,997-31,828,164 | + | - | - | - | - | - | Detail |
| CX3g025316 | 3:31,828,914-31,831,453 | - | C1H3g12909 | C2H3g03956 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| CX3g030622 | 3:31,832,347-31,835,528 | - | C1H3g09858 | C2H3g08821 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| CX3g027879 | 3:31,847,650-31,853,093 | - | C1H3g28154 | C2H3g28963 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| CX3g027734 | 3:31,855,061-31,858,785 | - | C1H3g21278 | C2H3g10484 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| CX3g028231 | 3:31,862,329-31,862,811 | + | - | - | - | - | - | Detail |
| CX3g029573 | 3:31,863,128-31,868,374 | + | C1H3g16235 | C2H3g29652 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| CX3g031210 | 3:31,869,951-31,871,065 | - | C1H3g01566 | C2H3g04502 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| CX3g029902 | 3:31,872,452-31,873,251 | - | C1H3g01354 | C2H3g09881 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| CX3g027786 | 3:31,879,384-31,888,188 | + | C1H3g00792 | C2H3g06928 | LOC_Os03g60240 | Os03g0817000 | - | Detail |
| CX3g024981 | 3:31,888,968-31,889,752 | - | C1H3g14662 | C2H3g19181 | LOC_Os03g60250 | Os03g0817100 | - | Detail |