| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g15323 | 7:2,997,345-2,999,550 | - | C1H7g31839 | CX7g050004 | LOC_Os07g06660 | Os07g0160400 | - | Detail |
| C2H7g04792 | 7:3,005,158-3,006,950 | + | C1H7g10977 | CX7g049818 | LOC_Os07g06670 | Os07g0160500 | - | Detail |
| C2H7g20200 | 7:3,010,160-3,013,488 | + | C1H7g30967 | CX7g046783 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| C2H7g10241 | 7:3,025,783-3,031,415 | - | C1H7g30885 | CX7g047372 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| C2H7g20288 | 7:3,034,009-3,036,013 | + | C1H7g26727 | CX7g046953 | LOC_Os07g06730 | Os07g0161500 | - | Detail |
| C2H7g04340 | 7:3,037,088-3,041,876 | - | C1H7g06448 | CX7g049860 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| C2H7g01138 | 7:3,044,727-3,045,254 | + | - | CX7g048179 | LOC_Os07g06750 | Os07g0161700 | - | Detail |
| C2H7g11082 | 7:3,059,356-3,061,108 | - | C1H7g15459 | CX7g048571 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| C2H7g29889 | 7:3,063,347-3,064,201 | - | - | CX7g049835 | LOC_Os07g06810 | Os07g0162200 | - | Detail |
| C2H7g01313 | 7:3,065,305-3,070,302 | + | C1H7g24248 | CX7g049055 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| C2H7g28686 | 7:3,074,945-3,075,937 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06830 | Os07g0162400 | - | Detail |
| C2H7g04371 | 7:3,081,209-3,082,192 | - | C1H7g12903 | CX7g048930 | LOC_Os07g06840 | Os07g0162500 | - | Detail |
| C2H7g19297 | 7:3,084,191-3,085,195 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06850 | Os07g0162600 | - | Detail |
| C2H7g23395 | 7:3,092,483-3,093,529 | - | C1H7g03092 | CX7g047650 | LOC_Os07g06860 | Os07g0162700 | - | Detail |
| C2H7g13583 | 7:3,109,890-3,110,882 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06880 | Os07g0162900 | - | Detail |
| C2H7g15677 | 7:3,112,928-3,119,804 | - | C1H7g06281 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C2H7g11414 | 7:3,122,576-3,124,884 | - | C1H7g03136 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C2H7g28250 | 7:3,127,611-3,128,989 | - | C1H7g06104 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C2H7g28897 | 7:3,141,972-3,154,158 | + | C1H7g10635 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C2H7g16342 | 7:3,162,056-3,173,815 | + | C1H7g30562 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026231 | 3:31,769,479-31,770,081 | + | C1H3g03324 | C2H3g07257 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| CX3g025206 | 3:31,775,440-31,775,748 | - | - | - | - | - | - | Detail |
| CX3g025448 | 3:31,780,825-31,784,002 | - | C1H3g23671 | C2H3g09561 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| CX3g030353 | 3:31,798,223-31,799,299 | + | C1H3g23594 | C2H3g11227 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| CX3g029581 | 3:31,800,505-31,806,275 | - | C1H3g00328 | C2H3g24873 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| CX3g025237 | 3:31,807,606-31,808,813 | + | C1H3g20794 | C2H3g04086 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| CX3g029363 | 3:31,815,608-31,819,259 | + | C1H3g22427 | C2H3g14885 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| CX3g030003 | 3:31,821,776-31,822,522 | - | C1H3g09437 | C2H3g05216 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| CX3g030342 | 3:31,824,483-31,827,206 | - | C1H3g16381 | C2H3g17896 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| CX3g030197 | 3:31,827,997-31,828,164 | + | - | - | - | - | - | Detail |
| CX3g025316 | 3:31,828,914-31,831,453 | - | C1H3g12909 | C2H3g03956 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| CX3g030622 | 3:31,832,347-31,835,528 | - | C1H3g09858 | C2H3g08821 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| CX3g027879 | 3:31,847,650-31,853,093 | - | C1H3g28154 | C2H3g28963 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| CX3g027734 | 3:31,855,061-31,858,785 | - | C1H3g21278 | C2H3g10484 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| CX3g028231 | 3:31,862,329-31,862,811 | + | - | - | - | - | - | Detail |
| CX3g029573 | 3:31,863,128-31,868,374 | + | C1H3g16235 | C2H3g29652 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| CX3g031210 | 3:31,869,951-31,871,065 | - | C1H3g01566 | C2H3g04502 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| CX3g029902 | 3:31,872,452-31,873,251 | - | C1H3g01354 | C2H3g09881 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| CX3g027786 | 3:31,879,384-31,888,188 | + | C1H3g00792 | C2H3g06928 | LOC_Os03g60240 | Os03g0817000 | - | Detail |
| CX3g024981 | 3:31,888,968-31,889,752 | - | C1H3g14662 | C2H3g19181 | LOC_Os03g60250 | Os03g0817100 | - | Detail |