| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11455 | 3:5,667,589-5,676,280 | - | C2H3g25606 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C1H3g05328 | 3:5,679,033-5,682,233 | - | C2H3g28200 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C1H3g22084 | 3:5,683,225-5,684,571 | - | - | CX1g001382 | - | - | - | Detail |
| C1H3g10920 | 3:5,689,450-5,690,709 | + | C2H3g21744 | CX3g029448 | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C1H3g07232 | 3:5,698,966-5,701,249 | + | C2H3g09344 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C1H3g04972 | 3:5,702,621-5,707,780 | + | C2H3g04698 | CX3g028958 | LOC_Os03g12236 | Os03g0222800 | - | Detail |
| C1H3g26972 | 3:5,709,181-5,711,242 | + | C2H3g19892 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C1H3g14957 | 3:5,715,416-5,719,293 | + | C2H3g10667 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C1H3g14297 | 3:5,724,282-5,725,868 | - | C2H3g29015 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C1H3g13087 | 3:5,730,852-5,733,610 | + | C2H3g13113 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C1H3g19225 | 3:5,739,506-5,740,695 | - | C2H3g16993 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C1H3g05930 | 3:5,741,048-5,743,366 | - | C2H3g28472 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C1H3g02751 | 3:5,747,807-5,755,905 | - | C2H3g01042 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C1H3g05662 | 3:5,768,070-5,772,723 | + | C2H3g20060 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C1H3g16565 | 3:5,781,460-5,786,781 | + | C2H3g29213 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C1H3g12418 | 3:5,787,327-5,791,771 | - | C2H3g11335 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C1H3g18389 | 3:5,803,605-5,807,389 | + | C2H3g05885 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C1H3g09012 | 3:5,811,317-5,812,336 | - | C2H3g25300 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C1H3g14793 | 3:5,818,975-5,823,594 | - | C2H3g05543 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C1H3g12506 | 3:5,824,997-5,826,409 | - | C2H3g22350 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026231 | 3:31,769,479-31,770,081 | + | C1H3g03324 | C2H3g07257 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| CX3g025206 | 3:31,775,440-31,775,748 | - | - | - | - | - | - | Detail |
| CX3g025448 | 3:31,780,825-31,784,002 | - | C1H3g23671 | C2H3g09561 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| CX3g030353 | 3:31,798,223-31,799,299 | + | C1H3g23594 | C2H3g11227 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| CX3g029581 | 3:31,800,505-31,806,275 | - | C1H3g00328 | C2H3g24873 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| CX3g025237 | 3:31,807,606-31,808,813 | + | C1H3g20794 | C2H3g04086 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| CX3g029363 | 3:31,815,608-31,819,259 | + | C1H3g22427 | C2H3g14885 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| CX3g030003 | 3:31,821,776-31,822,522 | - | C1H3g09437 | C2H3g05216 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| CX3g030342 | 3:31,824,483-31,827,206 | - | C1H3g16381 | C2H3g17896 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| CX3g030197 | 3:31,827,997-31,828,164 | + | - | - | - | - | - | Detail |
| CX3g025316 | 3:31,828,914-31,831,453 | - | C1H3g12909 | C2H3g03956 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| CX3g030622 | 3:31,832,347-31,835,528 | - | C1H3g09858 | C2H3g08821 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| CX3g027879 | 3:31,847,650-31,853,093 | - | C1H3g28154 | C2H3g28963 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| CX3g027734 | 3:31,855,061-31,858,785 | - | C1H3g21278 | C2H3g10484 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| CX3g028231 | 3:31,862,329-31,862,811 | + | - | - | - | - | - | Detail |
| CX3g029573 | 3:31,863,128-31,868,374 | + | C1H3g16235 | C2H3g29652 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| CX3g031210 | 3:31,869,951-31,871,065 | - | C1H3g01566 | C2H3g04502 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| CX3g029902 | 3:31,872,452-31,873,251 | - | C1H3g01354 | C2H3g09881 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| CX3g027786 | 3:31,879,384-31,888,188 | + | C1H3g00792 | C2H3g06928 | LOC_Os03g60240 | Os03g0817000 | - | Detail |
| CX3g024981 | 3:31,888,968-31,889,752 | - | C1H3g14662 | C2H3g19181 | LOC_Os03g60250 | Os03g0817100 | - | Detail |