| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05410 | 3:2,813,014-2,821,309 | + | C1H3g11682 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C2H3g11481 | 3:2,821,809-2,827,231 | - | C1H3g12948 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C2H3g04338 | 3:2,839,593-2,841,892 | + | C1H3g19950 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C2H3g04897 | 3:2,849,650-2,852,046 | + | C1H3g16884 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C2H3g20671 | 3:2,857,405-2,857,866 | - | C1H3g31680 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C2H3g16543 | 3:2,873,484-2,875,711 | + | C1H3g19723 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C2H3g18983 | 3:2,877,424-2,879,447 | + | C1H3g17239 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g18594 | 3:2,887,211-2,888,499 | + | - | - | - | - | - | Detail |
| C2H3g18217 | 3:2,889,436-2,891,957 | + | C1H3g19807 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C2H3g01853 | 3:2,903,303-2,903,873 | + | C1H3g07386 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C2H3g21314 | 3:2,911,394-2,912,892 | + | C1H3g24759 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C2H3g14410 | 3:2,930,448-2,934,898 | + | C1H3g16348 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C2H3g28634 | 3:2,935,603-2,936,034 | + | C1H3g31273 | - | - | - | - | Detail |
| C2H3g14053 | 3:2,936,052-2,938,523 | + | C1H3g16422 | CX3g027686 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| C2H3g03063 | 3:2,941,941-2,943,677 | + | C1H3g04672 | - | - | Os03g0163000 | - | Detail |
| C2H3g15393 | 3:2,944,725-2,952,303 | + | C1H3g10390 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C2H3g06714 | 3:2,952,491-2,953,976 | + | C1H3g23541 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C2H3g22693 | 3:2,954,872-2,959,579 | + | C1H3g17347 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C2H3g01887 | 3:2,960,166-2,961,935 | - | C1H3g06657 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C2H3g29355 | 3:2,964,329-2,966,695 | + | C1H3g03297 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028362 | 3:31,630,356-31,635,954 | - | C1H3g11302 | C2H3g12399 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| CX3g030481 | 3:31,643,828-31,645,692 | - | C1H3g11617 | C2H3g16986 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| CX3g028870 | 3:31,646,565-31,648,263 | + | C1H3g30674 | C2H3g19706 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| CX3g027301 | 3:31,649,068-31,652,712 | - | C1H3g01412 | C2H3g30149 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| CX3g030819 | 3:31,655,256-31,661,592 | + | C1H3g18901 | C2H3g14154 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| CX3g031200 | 3:31,662,357-31,667,360 | + | C1H3g26787 | C2H3g24154 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| CX3g028699 | 3:31,670,388-31,672,390 | + | C1H3g09735 | C2H3g07522 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| CX3g027906 | 3:31,675,007-31,676,357 | + | C1H3g09793 | C2H3g08986 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| CX3g026137 | 3:31,687,881-31,690,585 | - | C1H3g28609 | C2H3g03566 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| CX3g029579 | 3:31,692,001-31,692,546 | - | - | - | - | - | - | Detail |
| CX3g028706 | 3:31,696,158-31,697,087 | - | C1H3g20712 | C2H3g09547 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| CX3g027737 | 3:31,697,801-31,700,301 | - | C1H3g19969 | C2H3g28941 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| CX3g025510 | 3:31,700,612-31,701,004 | + | C1H3g31741 | C2H3g02470 | LOC_Os03g59710 | Os03g0811700 | - | Detail |
| CX3g025408 | 3:31,702,902-31,703,944 | - | C1H3g19079 | C2H3g05006 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| CX3g027595 | 3:31,708,997-31,710,920 | + | C1H3g30301 | C2H3g21955 | LOC_Os03g59740 | Os03g0811900 | - | Detail |
| CX3g025682 | 3:31,720,280-31,720,843 | + | - | - | LOC_Os07g30270 | Os03g0199800 | - | Detail |
| CX3g026970 | 3:31,727,750-31,728,313 | + | - | - | LOC_Os07g30270 | Os03g0199800 | - | Detail |
| CX3g028422 | 3:31,739,038-31,752,324 | - | C1H3g19228 | C2H3g19593 | - | Os03g0812000 | - | Detail |
| CX3g025855 | 3:31,759,181-31,760,281 | + | C1H3g24075 | C2H3g16505 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| CX3g030218 | 3:31,763,895-31,764,530 | + | C1H3g03324 | C2H3g14485 | LOC_Os03g59770 | Os03g0812400 | OsCaML2 | Detail |