| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19430 | 3:15,080,469-15,086,406 | + | C1H3g22073 | CX3g028877 | LOC_Os03g29180 | Os03g0405100 | - | Detail |
| C2H3g25754 | 3:15,091,238-15,096,992 | + | C1H3g16781 | CX3g028390 | LOC_Os03g29190 | Os03g0405500 | - | Detail |
| C2H3g20515 | 3:15,099,338-15,100,540 | + | C1H3g17133 | - | - | Os03g0405550 | - | Detail |
| C2H3g04139 | 3:15,114,141-15,117,818 | + | C1H3g04698 | CX3g029381 | LOC_Os03g29240 | Os03g0405900 | RRA3 | Detail |
| C2H3g28132 | 3:15,137,826-15,138,670 | + | C1H3g28025 | CX3g028079 | LOC_Os03g29250 | Os03g0406100 | OsSPX5 | Detail |
| C2H3g00155 | 3:15,148,759-15,152,299 | + | C1H3g14233 | CX3g025201 | LOC_Os03g29260 | Os03g0406200 | - | Detail |
| C2H3g23059 | 3:15,193,603-15,197,174 | + | C1H3g31034 | CX3g026877 | LOC_Os03g29340 | Os03g0406900 | OsMac4 | Detail |
| C2H3g26359 | 3:15,196,504-15,204,812 | - | C1H3g30818 | CX3g030450 | LOC_Os03g29350 | Os03g0407000 | - | Detail |
| C2H3g18043 | 3:15,227,805-15,230,360 | - | - | CX3g026274 | - | Os03g0407400 | GS3 | Detail |
| C2H3g08674 | 3:15,232,845-15,233,328 | - | C1H3g12617 | CX3g026274 | - | Os03g0407400 | GS3 | Detail |
| C2H3g00647 | 3:15,246,449-15,249,794 | - | C1H3g17471 | CX3g025160 | LOC_Os03g29410 | Os03g0407900 | - | Detail |
| C2H3g15951 | 3:15,286,336-15,290,992 | + | C1H3g10731 | CX3g027064 | LOC_Os03g29470 | Os03g0408500 | - | Detail |
| C2H3g04400 | 3:15,340,333-15,344,377 | - | C1H3g31871 | CX3g026777 | LOC_Os03g29570 | Os03g0409400 | - | Detail |
| C2H3g25735 | 3:15,345,030-15,347,893 | + | C1H3g21807 | CX3g031255 | LOC_Os03g29584 | - | - | Detail |
| C2H3g24065 | 3:15,365,947-15,369,263 | + | C1H3g12159 | CX3g031178 | LOC_Os03g29630 | Os03g0410100 | - | Detail |
| C2H3g24471 | 3:15,380,312-15,380,656 | - | C1H3g17148 | CX3g026992 | LOC_Os03g29680 | Os03g0410300 | - | Detail |
| C2H3g16726 | 3:15,394,716-15,397,705 | - | C1H3g03774 | CX3g028649 | LOC_Os03g29730 | Os03g0410700 | - | Detail |
| C2H3g26637 | 3:15,397,956-15,400,076 | + | C1H3g16818 | CX3g029764 | LOC_Os03g29740 | Os03g0410900 | - | Detail |
| C2H3g25819 | 3:15,406,691-15,412,809 | + | C1H3g23163 | CX3g026328 | LOC_Os03g29750 | Os03g0411000 | - | Detail |
| C2H3g03408 | 3:15,423,646-15,429,128 | + | C1H3g09595 | CX3g029428 | LOC_Os03g29760 | Os03g0411100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029953 | 3:31,504,415-31,507,040 | + | C1H3g05454 | C2H3g07099 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| CX3g029274 | 3:31,507,483-31,512,642 | - | C1H3g31749 | C2H3g27778 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| CX3g029533 | 3:31,514,745-31,516,229 | + | C1H3g18325 | C2H3g02177 | LOC_Os03g59350 | Os03g0808200 | - | Detail |
| CX3g028432 | 3:31,520,098-31,521,483 | - | C1H3g13091 | C2H3g01836 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| CX3g025805 | 3:31,525,346-31,526,396 | - | C1H3g25091 | C2H3g03811 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| CX3g026329 | 3:31,527,540-31,527,914 | + | - | - | LOC_Os03g59380 | Os03g0808500 | - | Detail |
| CX3g029797 | 3:31,540,740-31,540,889 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g024996 | 3:31,546,161-31,549,758 | + | C1H3g20305 | C2H3g04526 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| CX3g029969 | 3:31,558,696-31,563,001 | + | C1H3g10123 | C2H3g07709 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| CX3g025123 | 3:31,563,870-31,564,430 | - | C1H3g01230 | C2H3g20835 | LOC_Os03g59440 | Os03g0809000 | - | Detail |
| CX3g025915 | 3:31,567,062-31,570,428 | - | C1H3g21680 | C2H3g29438 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| CX3g029386 | 3:31,571,588-31,573,965 | + | C1H3g00029 | C2H3g20629 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| CX3g030061 | 3:31,575,197-31,577,980 | - | C1H3g24410 | C2H3g29142 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| CX3g026207 | 3:31,579,067-31,583,353 | - | C1H3g00154 | C2H3g26798 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| CX3g029129 | 3:31,588,742-31,593,540 | + | C1H3g24704 | C2H3g14868 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| CX3g029771 | 3:31,594,164-31,595,278 | - | C1H3g10761 | C2H3g12384 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| CX3g027672 | 3:31,596,795-31,601,489 | + | C1H3g08226 | C2H3g15000 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| CX3g030604 | 3:31,607,773-31,608,831 | + | C1H3g24094 | C2H3g26577 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| CX3g026718 | 3:31,616,080-31,616,463 | + | - | - | - | - | - | Detail |
| CX3g027297 | 3:31,620,258-31,622,684 | - | C1H3g21092 | C2H3g13200 | LOC_Os03g59580 | Os03g0810300 | - | Detail |