| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18526 | 2:29,792,749-29,793,847 | + | C1H2g11022 | CX2g022902 | LOC_Os02g53230 | - | - | Detail |
| C2H2g03730 | 2:29,795,166-29,795,429 | - | C1H2g26130 | CX2g024189 | LOC_Os02g53250 | Os02g0772200 | - | Detail |
| C2H2g25549 | 2:29,797,408-29,799,703 | + | C1H2g11093 | CX2g024622 | LOC_Os02g53260 | Os02g0772300 | - | Detail |
| C2H2g06676 | 2:29,801,398-29,810,702 | + | C1H2g09184 | CX2g021573 | LOC_Os02g53270 | Os02g0772500 | - | Detail |
| C2H2g12559 | 2:29,811,401-29,814,054 | - | C1H2g18055 | CX2g020239 | LOC_Os02g53280 | Os02g0772600 | - | Detail |
| C2H2g06283 | 2:29,841,145-29,842,018 | + | C1H2g02313 | CX2g024470 | LOC_Os02g53320 | Os02g0773200 | - | Detail |
| C2H2g25592 | 2:29,842,460-29,845,916 | - | C1H2g08102 | CX2g019558 | LOC_Os02g53330 | Os02g0773300 | OsDCD1 | Detail |
| C2H2g27938 | 2:29,846,134-29,855,739 | + | C1H2g25749 | CX2g021420 | LOC_Os02g53340 | Os02g0773400 | OsCNGC12 | Detail |
| C2H2g00448 | 2:29,859,599-29,860,174 | - | - | CX2g023673 | LOC_Os02g53350 | Os02g0773500 | - | Detail |
| C2H2g08525 | 2:29,862,181-29,863,768 | - | C1H2g17806 | CX2g023373 | LOC_Os02g53360 | Os02g0773600 | - | Detail |
| C2H2g16066 | 2:29,866,636-29,869,536 | - | C1H2g25824 | CX2g019915 | LOC_Os02g53380 | Os02g0773732 | - | Detail |
| C2H2g17035 | 2:29,875,390-29,877,012 | + | - | - | - | - | - | Detail |
| C2H2g10384 | 2:29,877,537-29,877,848 | - | C1H2g01365 | CX2g024637 | LOC_Os02g53410 | Os02g0774200 | - | Detail |
| C2H2g07217 | 2:29,879,552-29,883,896 | - | C1H2g01399 | CX2g021368 | LOC_Os02g53420 | Os02g0774300 | - | Detail |
| C2H2g12161 | 2:29,885,350-29,887,351 | - | C1H2g13274 | CX2g019046 | LOC_Os02g53430 | Os02g0774500 | - | Detail |
| C2H2g22967 | 2:29,892,271-29,895,442 | + | C1H2g22474 | CX2g024874 | - | Os02g0774800 | - | Detail |
| C2H2g15356 | 2:29,912,155-29,912,346 | - | C1H2g06446 | - | - | - | - | Detail |
| C2H2g02849 | 2:29,912,812-29,914,976 | - | - | - | - | - | - | Detail |
| C2H2g06998 | 2:29,919,039-29,921,242 | + | C1H2g29192 | CX2g024255 | LOC_Os02g53490 | Os02g0775100 | MTP8.2 | Detail |
| C2H2g11710 | 2:29,921,454-29,925,875 | - | C1H2g06460 | CX2g020145 | LOC_Os02g53500 | Os02g0775200 | OsRFC3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029953 | 3:31,504,415-31,507,040 | + | C1H3g05454 | C2H3g07099 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| CX3g029274 | 3:31,507,483-31,512,642 | - | C1H3g31749 | C2H3g27778 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| CX3g029533 | 3:31,514,745-31,516,229 | + | C1H3g18325 | C2H3g02177 | LOC_Os03g59350 | Os03g0808200 | - | Detail |
| CX3g028432 | 3:31,520,098-31,521,483 | - | C1H3g13091 | C2H3g01836 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| CX3g025805 | 3:31,525,346-31,526,396 | - | C1H3g25091 | C2H3g03811 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| CX3g026329 | 3:31,527,540-31,527,914 | + | - | - | LOC_Os03g59380 | Os03g0808500 | - | Detail |
| CX3g029797 | 3:31,540,740-31,540,889 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g024996 | 3:31,546,161-31,549,758 | + | C1H3g20305 | C2H3g04526 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| CX3g029969 | 3:31,558,696-31,563,001 | + | C1H3g10123 | C2H3g07709 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| CX3g025123 | 3:31,563,870-31,564,430 | - | C1H3g01230 | C2H3g20835 | LOC_Os03g59440 | Os03g0809000 | - | Detail |
| CX3g025915 | 3:31,567,062-31,570,428 | - | C1H3g21680 | C2H3g29438 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| CX3g029386 | 3:31,571,588-31,573,965 | + | C1H3g00029 | C2H3g20629 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| CX3g030061 | 3:31,575,197-31,577,980 | - | C1H3g24410 | C2H3g29142 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| CX3g026207 | 3:31,579,067-31,583,353 | - | C1H3g00154 | C2H3g26798 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| CX3g029129 | 3:31,588,742-31,593,540 | + | C1H3g24704 | C2H3g14868 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| CX3g029771 | 3:31,594,164-31,595,278 | - | C1H3g10761 | C2H3g12384 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| CX3g027672 | 3:31,596,795-31,601,489 | + | C1H3g08226 | C2H3g15000 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| CX3g030604 | 3:31,607,773-31,608,831 | + | C1H3g24094 | C2H3g26577 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| CX3g026718 | 3:31,616,080-31,616,463 | + | - | - | - | - | - | Detail |
| CX3g027297 | 3:31,620,258-31,622,684 | - | C1H3g21092 | C2H3g13200 | LOC_Os03g59580 | Os03g0810300 | - | Detail |