| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09396 | 4:1,954,243-1,955,475 | + | - | CX4g032889 | LOC_Os04g04980 | - | - | Detail |
| C1H4g14951 | 4:1,958,690-1,959,076 | + | - | CX4g035481 | - | - | - | Detail |
| C1H4g07691 | 4:1,959,969-1,962,779 | - | C2H4g13248 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C1H4g00435 | 4:1,983,301-1,984,281 | + | C2H4g08946 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C1H4g17319 | 4:2,015,691-2,021,182 | + | C2H4g24029 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C1H4g25434 | 4:2,025,548-2,026,861 | + | C2H7g00832 | CX7g049825 | LOC_Os08g36610 | Os08g0470000 | - | Detail |
| C1H4g22056 | 4:2,039,862-2,040,605 | - | C2H4g03790 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C1H4g09732 | 4:2,048,855-2,052,166 | + | C2H4g29226 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C1H4g03654 | 4:2,104,746-2,106,344 | + | C2H4g12932 | CX4g032369 | LOC_Os04g05560 | Os04g0141400 | - | Detail |
| C1H4g03587 | 4:2,115,368-2,119,550 | + | C2H4g05331 | CX4g032104 | LOC_Os04g05580 | Os04g0146300 | - | Detail |
| C1H4g20211 | 4:2,148,969-2,151,089 | + | C2H4g20001 | CX4g031557 | LOC_Os04g06900 | Os04g0141800 | - | Detail |
| C1H4g00711 | 4:2,174,652-2,176,874 | + | C2H4g04256 | CX4g034357 | LOC_Os04g06500 | Os04g0147200 | - | Detail |
| C1H4g06528 | 4:2,183,226-2,185,343 | - | C2H4g26531 | CX4g034971 | LOC_Os04g05360 | Os04g0139100 | - | Detail |
| C1H4g27563 | 4:2,218,614-2,220,309 | + | C2H4g27755 | CX4g032274 | LOC_Os04g07110 | Os04g0154800 | - | Detail |
| C1H4g12610 | 4:2,259,803-2,261,041 | - | C2H4g22457 | CX4g034548 | LOC_Os04g06520 | Os04g0149400 | - | Detail |
| C1H4g22103 | 4:2,265,592-2,267,862 | + | C2H4g26531 | CX4g034656 | LOC_Os04g06590 | Os04g0150300 | - | Detail |
| C1H4g02050 | 4:2,289,757-2,290,292 | + | C2H4g16574 | CX4g033175 | LOC_Os04g06734 | Os04g0151700 | - | Detail |
| C1H4g26398 | 4:2,327,497-2,328,799 | + | C2H4g29954 | CX4g033175 | LOC_Os04g06734 | Os04g0151700 | - | Detail |
| C1H4g03885 | 4:2,338,961-2,346,616 | - | C2H4g22772 | CX4g033821 | LOC_Os04g06770 | Os04g0151800 | - | Detail |
| C1H4g04643 | 4:2,357,614-2,360,689 | - | C2H4g29394 | CX4g031659 | LOC_Os04g06790 | Os04g0151900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029953 | 3:31,504,415-31,507,040 | + | C1H3g05454 | C2H3g07099 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| CX3g029274 | 3:31,507,483-31,512,642 | - | C1H3g31749 | C2H3g27778 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| CX3g029533 | 3:31,514,745-31,516,229 | + | C1H3g18325 | C2H3g02177 | LOC_Os03g59350 | Os03g0808200 | - | Detail |
| CX3g028432 | 3:31,520,098-31,521,483 | - | C1H3g13091 | C2H3g01836 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| CX3g025805 | 3:31,525,346-31,526,396 | - | C1H3g25091 | C2H3g03811 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| CX3g026329 | 3:31,527,540-31,527,914 | + | - | - | LOC_Os03g59380 | Os03g0808500 | - | Detail |
| CX3g029797 | 3:31,540,740-31,540,889 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g024996 | 3:31,546,161-31,549,758 | + | C1H3g20305 | C2H3g04526 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| CX3g029969 | 3:31,558,696-31,563,001 | + | C1H3g10123 | C2H3g07709 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| CX3g025123 | 3:31,563,870-31,564,430 | - | C1H3g01230 | C2H3g20835 | LOC_Os03g59440 | Os03g0809000 | - | Detail |
| CX3g025915 | 3:31,567,062-31,570,428 | - | C1H3g21680 | C2H3g29438 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| CX3g029386 | 3:31,571,588-31,573,965 | + | C1H3g00029 | C2H3g20629 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| CX3g030061 | 3:31,575,197-31,577,980 | - | C1H3g24410 | C2H3g29142 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| CX3g026207 | 3:31,579,067-31,583,353 | - | C1H3g00154 | C2H3g26798 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| CX3g029129 | 3:31,588,742-31,593,540 | + | C1H3g24704 | C2H3g14868 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| CX3g029771 | 3:31,594,164-31,595,278 | - | C1H3g10761 | C2H3g12384 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| CX3g027672 | 3:31,596,795-31,601,489 | + | C1H3g08226 | C2H3g15000 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| CX3g030604 | 3:31,607,773-31,608,831 | + | C1H3g24094 | C2H3g26577 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| CX3g026718 | 3:31,616,080-31,616,463 | + | - | - | - | - | - | Detail |
| CX3g027297 | 3:31,620,258-31,622,684 | - | C1H3g21092 | C2H3g13200 | LOC_Os03g59580 | Os03g0810300 | - | Detail |