| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15807 | 2:5,046,468-5,051,199 | + | C1H2g10529 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C2H2g25569 | 2:5,052,010-5,058,918 | - | C1H2g05539 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C2H2g18783 | 2:5,072,117-5,073,751 | - | C1H2g08158 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C2H2g11987 | 2:5,088,073-5,089,026 | - | C1H2g24423 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C2H2g02789 | 2:5,093,736-5,096,612 | + | C1H2g30492 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C2H2g20503 | 2:5,097,184-5,098,473 | - | C1H2g18635 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C2H2g05452 | 2:5,104,599-5,110,437 | - | C1H2g14720 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C2H2g30668 | 2:5,113,316-5,118,771 | - | C1H2g22079 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C2H2g20119 | 2:5,123,316-5,128,196 | + | C1H2g00290 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C2H2g08800 | 2:5,130,998-5,133,053 | - | C1H2g01509 | CX2g020248 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C2H2g20788 | 2:5,137,722-5,141,639 | + | C1H2g22046 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C2H2g24738 | 2:5,142,524-5,145,851 | - | C1H2g10608 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C2H2g10447 | 2:5,155,962-5,157,179 | - | C1H2g13038 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C2H2g27059 | 2:5,157,812-5,161,199 | - | C1H2g25618 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| C2H2g02539 | 2:5,185,476-5,186,006 | - | C1H2g23514 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C2H2g22913 | 2:5,201,611-5,204,821 | - | C1H2g23712 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C2H2g21450 | 2:5,220,163-5,220,890 | + | C1H2g24067 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C2H2g30620 | 2:5,225,622-5,228,362 | - | C1H2g20496 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C2H2g13782 | 2:5,235,698-5,238,079 | + | C1H2g04540 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C2H2g29179 | 2:5,239,700-5,268,576 | - | C1H2g00291 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025026 | 3:31,372,896-31,376,578 | - | C1H3g07263 | C2H3g11637 | LOC_Os03g59050 | Os03g0805200 | - | Detail |
| CX3g030776 | 3:31,382,127-31,386,116 | + | C1H3g20361 | C2H3g13249 | LOC_Os03g59060 | Os03g0805300 | OsPP2A-2 | Detail |
| CX3g031092 | 3:31,388,097-31,390,345 | - | C1H3g19091 | C2H3g08127 | LOC_Os03g59070 | Os03g0805400 | - | Detail |
| CX3g028812 | 3:31,392,612-31,397,036 | - | C1H3g12066 | C2H3g28737 | LOC_Os03g59080 | Os03g0805500 | - | Detail |
| CX3g030524 | 3:31,419,044-31,421,626 | + | C1H3g07939 | C2H3g16313 | LOC_Os03g59120 | Os03g0805900 | - | Detail |
| CX3g030941 | 3:31,422,559-31,426,240 | - | C1H3g06635 | C2H3g13126 | LOC_Os03g59160 | Os03g0806400 | - | Detail |
| CX3g027239 | 3:31,427,304-31,429,910 | + | C1H3g22886 | C2H3g27858 | LOC_Os03g59170 | Os03g0806500 | - | Detail |
| CX3g026016 | 3:31,431,407-31,432,477 | + | C1H3g27480 | C2H3g13367 | LOC_Os03g59180 | Os03g0806600 | - | Detail |
| CX3g028300 | 3:31,442,000-31,442,704 | + | C1H3g02437 | - | LOC_Os03g59200 | Os03g0806700 | - | Detail |
| CX3g025205 | 3:31,446,490-31,446,853 | + | C1H7g05822 | C2H3g13696 | LOC_Os03g59210 | Os03g0806800 | - | Detail |
| CX3g026400 | 3:31,448,119-31,448,568 | + | C1H3g13375 | C2H3g21807 | LOC_Os03g59220 | Os03g0806900 | - | Detail |
| CX3g030637 | 3:31,451,644-31,452,015 | + | - | - | LOC_Os03g59225 | Os03g0807000 | - | Detail |
| CX3g026921 | 3:31,460,214-31,463,117 | + | C1H3g26885 | C2H3g14008 | LOC_Os03g59240 | Os03g0807100 | - | Detail |
| CX3g028660 | 3:31,465,718-31,466,639 | - | C1H3g11037 | C2H3g07423 | LOC_Os03g59250 | Os03g0807200 | OsDUF1639.1 | Detail |
| CX3g025343 | 3:31,470,594-31,476,403 | - | C1H3g16706 | C2H3g14894 | LOC_Os03g59264 | Os03g0807400 | - | Detail |
| CX3g027491 | 3:31,478,859-31,481,594 | + | C1H3g08998 | C2H3g04449 | LOC_Os03g59280 | Os03g0807500 | - | Detail |
| CX3g030187 | 3:31,482,181-31,485,093 | - | C1H3g08149 | C2H3g23454 | LOC_Os03g59290 | Os03g0807600 | - | Detail |
| CX3g028893 | 3:31,492,820-31,494,626 | + | C1H3g21319 | C2H3g28073 | LOC_Os03g59300 | Os03g0807700 | - | Detail |
| CX3g030569 | 3:31,496,290-31,497,907 | + | C1H3g20626 | C2H3g16190 | LOC_Os03g59310 | Os03g0807800 | - | Detail |
| CX3g030704 | 3:31,499,196-31,500,390 | + | C1H3g05345 | C2H3g13799 | LOC_Os03g59320 | Os03g0807900 | - | Detail |