| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16031 | 12:4,495,209-4,495,847 | - | C1H12g00057 | CX12g018011 | - | - | - | Detail |
| C2H12g13338 | 12:4,504,009-4,509,180 | - | C1H12g21936 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g07984 | 12:4,516,918-4,520,606 | + | C1H12g18620 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C2H12g13398 | 12:4,522,686-4,525,643 | - | C1H12g20422 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g09085 | 12:4,531,956-4,542,029 | - | C1H12g03660 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C2H12g25382 | 12:4,561,839-4,565,485 | + | C1H12g18718 | - | - | - | - | Detail |
| C2H12g21993 | 12:4,568,789-4,571,070 | + | C1H12g29942 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C2H12g02513 | 12:4,596,026-4,598,793 | - | C1H12g23734 | CX12g017268 | LOC_Os11g14670 | - | - | Detail |
| C2H12g06069 | 12:4,610,752-4,611,165 | - | C1H12g26851 | - | - | - | - | Detail |
| C2H12g23156 | 12:4,724,987-4,726,528 | + | C1H12g08099 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C2H12g10521 | 12:4,727,388-4,728,439 | + | C1H12g25986 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C2H12g28534 | 12:4,729,007-4,735,179 | - | C1H12g24838 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C2H12g14596 | 12:4,736,631-4,738,688 | + | C1H12g13815 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C2H12g19800 | 12:4,739,696-4,743,084 | + | C1H12g15070 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C2H12g26432 | 12:4,744,095-4,746,553 | - | C1H12g07643 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C2H12g29948 | 12:4,750,872-4,752,957 | + | C1H12g30565 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C2H12g27282 | 12:4,780,000-4,780,482 | + | C1H12g14694 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C2H12g03169 | 12:4,781,447-4,786,377 | + | C1H12g14346 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C2H12g06639 | 12:4,791,041-4,794,004 | + | C1H12g25521 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C2H12g05093 | 12:4,816,407-4,818,311 | - | C1H12g12793 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027669 | 3:31,243,799-31,244,422 | - | C1H3g06385 | - | LOC_Os02g39530 | Os02g0608200 | - | Detail |
| CX3g025546 | 3:31,247,754-31,249,319 | + | C1H3g23323 | C2H3g07093 | LOC_Os03g58790 | Os03g0802500 | OsAAA-ATPase1 | Detail |
| CX3g029310 | 3:31,253,405-31,255,200 | + | C1H3g23323 | C2H3g07093 | LOC_Os03g58800 | Os03g0802600 | - | Detail |
| CX3g031125 | 3:31,255,445-31,259,073 | - | C1H3g23165 | C2H3g04258 | LOC_Os03g58810 | Os03g0802700 | - | Detail |
| CX3g026858 | 3:31,260,114-31,265,863 | - | C1H3g24318 | C2H3g14685 | LOC_Os03g58820 | Os03g0802800 | - | Detail |
| CX3g029318 | 3:31,266,734-31,270,465 | - | C1H3g09968 | C2H3g03398 | LOC_Os03g58830 | Os03g0802900 | - | Detail |
| CX3g027749 | 3:31,272,604-31,275,518 | + | C1H3g24192 | C2H3g17483 | LOC_Os03g58840 | Os03g0803000 | - | Detail |
| CX3g026143 | 3:31,280,175-31,280,666 | - | C1H3g22193 | C2H3g08295 | LOC_Os03g58850 | Os03g0803100 | - | Detail |
| CX3g028924 | 3:31,285,426-31,285,680 | - | C1H3g05018 | C2H3g05041 | LOC_Os03g58870 | Os03g0803200 | - | Detail |
| CX3g027844 | 3:31,289,848-31,291,571 | - | C1H3g17883 | C2H3g25525 | LOC_Os03g58890 | Os03g0803500 | - | Detail |
| CX3g029942 | 3:31,297,487-31,311,663 | - | C1H3g08097 | C2H3g20910 | LOC_Os03g58910 | Os03g0803800 | - | Detail |
| CX3g025337 | 3:31,320,709-31,323,222 | + | C1H3g13889 | C2H3g08052 | LOC_Os03g58930 | Os03g0804100 | - | Detail |
| CX3g027592 | 3:31,330,530-31,332,199 | + | C1H3g18947 | C2H3g30090 | LOC_Os03g58940 | Os03g0804200 | - | Detail |
| CX3g024943 | 3:31,335,229-31,340,121 | - | C1H3g08908 | C2H3g10876 | LOC_Os03g58960 | Os03g0804300 | - | Detail |
| CX3g027330 | 3:31,341,940-31,346,975 | + | C1H3g16246 | C2H3g27290 | LOC_Os03g58970 | Os03g0804400 | - | Detail |
| CX3g029362 | 3:31,348,735-31,349,403 | + | C1H3g26409 | C2H3g28657 | LOC_Os03g58980 | Os03g0804500 | OsGLP3-7 | Detail |
| CX3g025687 | 3:31,352,789-31,353,484 | + | C1H3g26409 | C2H3g28657 | LOC_Os03g59010 | Os03g0804700 | - | Detail |
| CX3g028935 | 3:31,354,529-31,359,385 | + | C1H3g07772 | C2H3g08677 | LOC_Os03g59020 | Os03g0804800 | - | Detail |
| CX3g027095 | 3:31,360,698-31,362,512 | - | C1H3g18006 | C2H3g02565 | LOC_Os03g59030 | Os03g0804900 | - | Detail |
| CX3g030857 | 3:31,365,599-31,371,968 | + | C1H3g15435 | C2H3g23943 | LOC_Os03g59040 | Os03g0805100 | - | Detail |