| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01899 | 5:18,875,099-18,877,942 | + | C2H5g18865 | CX5g036944 | LOC_Os05g39310 | Os05g0469600 | Ospdc1 | Detail |
| C1H5g17771 | 5:18,881,373-18,881,975 | + | C2H5g07982 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C1H5g02466 | 5:18,881,994-18,883,702 | + | C2H5g08481 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C1H5g04421 | 5:18,884,566-18,887,625 | - | C2H5g06883 | CX5g040121 | LOC_Os05g39350 | Os05g0470000 | - | Detail |
| C1H5g12895 | 5:18,902,653-18,904,332 | + | C2H5g07736 | CX5g040095 | LOC_Os05g39380 | Os05g0470700 | - | Detail |
| C1H5g00959 | 5:18,906,484-18,910,205 | - | C2H5g12492 | CX5g040306 | LOC_Os05g39390 | Os05g0470800 | - | Detail |
| C1H5g29961 | 5:18,911,820-18,913,268 | + | C2H5g12700 | CX5g037125 | LOC_Os05g39400 | Os05g0470900 | - | Detail |
| C1H5g06052 | 5:18,913,490-18,917,156 | - | C2H5g26893 | CX5g036882 | LOC_Os05g39410 | Os05g0471000 | - | Detail |
| C1H5g06723 | 5:18,926,606-18,928,072 | - | - | - | - | - | - | Detail |
| C1H5g19650 | 5:18,928,515-18,929,420 | - | C2H5g07606 | - | - | - | - | Detail |
| C1H5g25585 | 5:18,930,484-18,931,254 | - | C2H5g10143 | CX5g037860 | LOC_Os05g39450 | Os05g0471350 | - | Detail |
| C1H5g09380 | 5:18,952,236-18,952,952 | + | C2H5g21299 | CX5g039840 | LOC_Os05g39500 | Os05g0472000 | OsG1L8 | Detail |
| C1H5g12229 | 5:18,966,051-18,970,708 | - | C2H5g25272 | CX5g036972 | LOC_Os05g39520 | Os05g0472200 | - | Detail |
| C1H5g23504 | 5:18,971,619-18,974,005 | - | C2H5g07324 | CX5g038206 | LOC_Os05g39530 | Os05g0472300 | - | Detail |
| C1H5g14755 | 5:18,982,528-18,986,510 | + | C2H5g02174 | CX5g040617 | LOC_Os05g39540 | Os05g0472400 | OsZIP9 | Detail |
| C1H5g09021 | 5:18,990,753-18,992,906 | + | C2H5g12063 | CX5g038639 | LOC_Os05g39560 | Os05g0472700 | OsZIP5 | Detail |
| C1H5g31249 | 5:19,004,727-19,005,392 | - | C2H5g11951 | CX5g039388 | LOC_Os05g39580 | Os05g0473000 | - | Detail |
| C1H5g27001 | 5:19,011,796-19,013,509 | + | - | CX5g036978 | - | - | - | Detail |
| C1H5g23864 | 5:19,014,778-19,016,340 | + | C2H5g19718 | CX5g039698 | LOC_Os05g39590 | Os05g0473300 | - | Detail |
| C1H5g20386 | 5:19,017,849-19,020,703 | + | C2H5g12883 | CX5g039234 | LOC_Os05g39600 | Os05g0473401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028436 | 3:31,112,390-31,113,143 | + | C1H3g27400 | C2H3g24790 | LOC_Os03g58520 | Os03g0799500 | - | Detail |
| CX3g026773 | 3:31,114,552-31,119,012 | + | C1H3g03166 | C2H3g17610 | LOC_Os03g58530 | Os03g0799600 | - | Detail |
| CX3g031023 | 3:31,120,455-31,124,085 | + | C1H3g23240 | C2H3g03002 | LOC_Os03g58540 | Os03g0799700 | TSV3, OsObgC2 | Detail |
| CX3g028846 | 3:31,132,227-31,135,538 | + | C1H3g05452 | C2H3g02702 | LOC_Os03g58570 | Os03g0799900 | - | Detail |
| CX3g025907 | 3:31,144,799-31,146,568 | + | - | C2H3g27946 | LOC_Os03g58580 | Os03g0800000 | - | Detail |
| CX3g028891 | 3:31,147,915-31,154,032 | + | C1H3g28576 | C2H3g08530 | LOC_Os03g58590 | Os03g0800100 | - | Detail |
| CX3g030682 | 3:31,155,302-31,164,025 | - | C1H3g06142 | C2H3g26883 | LOC_Os03g58600 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| CX3g025373 | 3:31,170,278-31,175,475 | - | C1H3g31832 | C2H3g21138 | LOC_Os03g58610 | Os03g0800400 | - | Detail |
| CX3g026714 | 3:31,176,219-31,178,029 | - | C1H3g31423 | C2H3g18555 | LOC_Os03g58630 | Os03g0800700 | - | Detail |
| CX3g026264 | 3:31,179,063-31,187,205 | - | C1H3g10764 | C2H3g28838 | LOC_Os03g58640 | Os03g0800800 | - | Detail |
| CX3g030817 | 3:31,187,699-31,187,857 | - | - | - | - | - | - | Detail |
| CX3g026772 | 3:31,189,565-31,191,987 | + | C1H3g00648 | C2H3g25793 | LOC_Os03g58690 | Os03g0801500 | - | Detail |
| CX3g029798 | 3:31,192,799-31,193,020 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g030423 | 3:31,194,152-31,201,904 | + | C1H3g06085 | C2H3g03346 | LOC_Os03g58700 | Os03g0801600 | - | Detail |
| CX3g026599 | 3:31,203,151-31,205,825 | - | C1H3g07389 | C2H3g21897 | LOC_Os03g58710 | Os03g0801700 | - | Detail |
| CX3g026853 | 3:31,206,950-31,213,872 | + | C1H3g31741 | C2H3g02470 | LOC_Os03g58720 | Os03g0801800 | - | Detail |
| CX3g028194 | 3:31,216,629-31,218,070 | + | C1H3g13444 | C2H3g24055 | LOC_Os03g58740 | Os03g0801900 | - | Detail |
| CX3g028602 | 3:31,222,586-31,223,902 | + | C1H3g10808 | C2H3g10218 | LOC_Os03g58750 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g027259 | 3:31,228,664-31,235,299 | + | C1H3g24645 | C2H3g06737 | LOC_Os03g58764 | Os03g0802100 | - | Detail |
| CX3g026467 | 3:31,237,016-31,242,448 | - | C1H3g27952 | C2H3g22987 | LOC_Os03g58780 | Os03g0802300 | - | Detail |