| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05595 | 1:2,322,241-2,326,700 | + | C2H1g26068 | CX1g004686 | LOC_Os01g05820 | Os01g0151500 | - | Detail |
| C1H1g02351 | 1:2,330,322-2,330,582 | + | C2H1g26068 | CX1g002082 | LOC_Os01g05820 | Os01g0151400 | - | Detail |
| C1H1g31170 | 1:2,331,403-2,335,866 | + | C2H1g03197 | CX1g003613 | LOC_Os01g05830 | Os01g0151600 | - | Detail |
| C1H1g20436 | 1:2,342,219-2,344,926 | + | C2H1g12467 | CX1g001726 | LOC_Os01g05840 | Os01g0151700 | - | Detail |
| C1H1g08418 | 1:2,347,080-2,348,897 | + | C2H1g28796 | - | LOC_Os01g05860 | Os01g0151900 | - | Detail |
| C1H1g31653 | 1:2,351,695-2,356,767 | + | C2H1g14744 | - | LOC_Os01g05870 | Os01g0152000 | - | Detail |
| C1H1g04326 | 1:2,362,296-2,363,552 | - | C2H1g10532 | - | LOC_Os01g05880 | Os01g0152100 | - | Detail |
| C1H1g18225 | 1:2,366,357-2,366,803 | - | C2H1g27601 | - | LOC_Os01g05890 | Os01g0152200 | - | Detail |
| C1H1g10379 | 1:2,366,945-2,367,607 | - | C2H1g27601 | - | LOC_Os01g05880 | Os01g0152100 | - | Detail |
| C1H1g23535 | 1:2,372,088-2,372,762 | + | C2H1g06791 | - | LOC_Os01g05940 | Os01g0152600 | - | Detail |
| C1H1g23100 | 1:2,372,854-2,375,407 | + | C2H1g06791 | - | LOC_Os01g05940 | Os01g0152600 | - | Detail |
| C1H1g23264 | 1:2,376,899-2,380,706 | + | C2H1g00932 | - | LOC_Os01g05940 | Os01g0152687 | - | Detail |
| C1H1g25728 | 1:2,381,453-2,385,021 | + | C2H2g17047 | - | - | Os03g0578300 | - | Detail |
| C1H1g10783 | 1:2,405,129-2,408,394 | + | C2H1g14033 | - | LOC_Os01g05960 | Os01g0152800 | - | Detail |
| C1H1g00271 | 1:2,409,958-2,410,410 | - | C2H1g18813 | CX1g005739 | LOC_Os01g05610 | Os01g0152700 | - | Detail |
| C1H1g31172 | 1:2,411,331-2,412,383 | - | C2H1g02854 | - | - | - | - | Detail |
| C1H1g24758 | 1:2,411,602-2,414,707 | + | C2H1g14033 | CX1g006643 | LOC_Os01g05960 | Os01g0152800 | - | Detail |
| C1H1g09766 | 1:2,416,668-2,417,129 | - | C2H1g02854 | CX1g005739 | LOC_Os01g05630 | Os01g0152900 | - | Detail |
| C1H1g21562 | 1:2,425,856-2,429,278 | - | C2H1g09733 | - | LOC_Os01g05880 | Os01g0152950 | - | Detail |
| C1H1g26092 | 1:2,429,573-2,430,383 | + | - | - | - | Os01g0152951 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028436 | 3:31,112,390-31,113,143 | + | C1H3g27400 | C2H3g24790 | LOC_Os03g58520 | Os03g0799500 | - | Detail |
| CX3g026773 | 3:31,114,552-31,119,012 | + | C1H3g03166 | C2H3g17610 | LOC_Os03g58530 | Os03g0799600 | - | Detail |
| CX3g031023 | 3:31,120,455-31,124,085 | + | C1H3g23240 | C2H3g03002 | LOC_Os03g58540 | Os03g0799700 | TSV3, OsObgC2 | Detail |
| CX3g028846 | 3:31,132,227-31,135,538 | + | C1H3g05452 | C2H3g02702 | LOC_Os03g58570 | Os03g0799900 | - | Detail |
| CX3g025907 | 3:31,144,799-31,146,568 | + | - | C2H3g27946 | LOC_Os03g58580 | Os03g0800000 | - | Detail |
| CX3g028891 | 3:31,147,915-31,154,032 | + | C1H3g28576 | C2H3g08530 | LOC_Os03g58590 | Os03g0800100 | - | Detail |
| CX3g030682 | 3:31,155,302-31,164,025 | - | C1H3g06142 | C2H3g26883 | LOC_Os03g58600 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| CX3g025373 | 3:31,170,278-31,175,475 | - | C1H3g31832 | C2H3g21138 | LOC_Os03g58610 | Os03g0800400 | - | Detail |
| CX3g026714 | 3:31,176,219-31,178,029 | - | C1H3g31423 | C2H3g18555 | LOC_Os03g58630 | Os03g0800700 | - | Detail |
| CX3g026264 | 3:31,179,063-31,187,205 | - | C1H3g10764 | C2H3g28838 | LOC_Os03g58640 | Os03g0800800 | - | Detail |
| CX3g030817 | 3:31,187,699-31,187,857 | - | - | - | - | - | - | Detail |
| CX3g026772 | 3:31,189,565-31,191,987 | + | C1H3g00648 | C2H3g25793 | LOC_Os03g58690 | Os03g0801500 | - | Detail |
| CX3g029798 | 3:31,192,799-31,193,020 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g030423 | 3:31,194,152-31,201,904 | + | C1H3g06085 | C2H3g03346 | LOC_Os03g58700 | Os03g0801600 | - | Detail |
| CX3g026599 | 3:31,203,151-31,205,825 | - | C1H3g07389 | C2H3g21897 | LOC_Os03g58710 | Os03g0801700 | - | Detail |
| CX3g026853 | 3:31,206,950-31,213,872 | + | C1H3g31741 | C2H3g02470 | LOC_Os03g58720 | Os03g0801800 | - | Detail |
| CX3g028194 | 3:31,216,629-31,218,070 | + | C1H3g13444 | C2H3g24055 | LOC_Os03g58740 | Os03g0801900 | - | Detail |
| CX3g028602 | 3:31,222,586-31,223,902 | + | C1H3g10808 | C2H3g10218 | LOC_Os03g58750 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g027259 | 3:31,228,664-31,235,299 | + | C1H3g24645 | C2H3g06737 | LOC_Os03g58764 | Os03g0802100 | - | Detail |
| CX3g026467 | 3:31,237,016-31,242,448 | - | C1H3g27952 | C2H3g22987 | LOC_Os03g58780 | Os03g0802300 | - | Detail |