| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06439 | 2:31,275,931-31,277,383 | - | C1H2g20898 | CX2g022953 | LOC_Os02g56150 | Os02g0805300 | - | Detail |
| C2H2g06006 | 2:31,278,937-31,280,121 | + | C1H2g10661 | CX2g022860 | LOC_Os02g56160 | Os02g0805400 | - | Detail |
| C2H2g01737 | 2:31,280,795-31,283,102 | - | C1H2g18555 | CX2g022826 | LOC_Os02g56170 | Os02g0805500 | - | Detail |
| C2H2g08494 | 2:31,285,821-31,288,055 | + | C1H2g30498 | CX2g020022 | LOC_Os02g56180 | Os02g0805600 | - | Detail |
| C2H2g14716 | 2:31,288,706-31,290,315 | - | C1H2g02350 | CX2g021343 | LOC_Os02g56190 | Os02g0805700 | - | Detail |
| C2H2g17986 | 2:31,290,671-31,296,710 | - | C1H2g23840 | CX2g020646 | LOC_Os02g56200 | Os02g0805800 | - | Detail |
| C2H2g24720 | 2:31,297,639-31,300,981 | - | C1H2g23237 | CX2g023787 | LOC_Os02g56210 | Os02g0805900 | - | Detail |
| C2H2g30362 | 2:31,301,191-31,305,118 | + | C1H2g02510 | CX2g019538 | LOC_Os02g56219 | Os02g0806000 | - | Detail |
| C2H2g18959 | 2:31,321,280-31,326,570 | + | C1H2g15285 | CX2g020018 | LOC_Os02g56250 | Os02g0645600 | - | Detail |
| C2H2g08061 | 2:31,328,064-31,329,080 | - | C1H2g12003 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C2H2g09745 | 2:31,329,148-31,330,929 | - | C1H2g24733 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C2H2g16259 | 2:31,334,180-31,339,847 | - | C1H2g09037 | CX2g020940 | LOC_Os02g56270 | Os02g0806600 | - | Detail |
| C2H2g09054 | 2:31,345,864-31,350,488 | - | C1H2g15153 | CX2g022386 | LOC_Os02g56280 | Os02g0806700 | - | Detail |
| C2H2g30201 | 2:31,363,723-31,367,828 | + | C1H2g31054 | CX2g020392 | LOC_Os02g56300 | Os02g0806900 | - | Detail |
| C2H2g10670 | 2:31,369,565-31,370,991 | - | C1H2g07550 | CX2g019216 | LOC_Os02g56310 | Os02g0807000 | - | Detail |
| C2H2g10723 | 2:31,375,874-31,383,656 | + | C1H2g30707 | CX2g020511 | LOC_Os02g56320 | Os02g0807100 | SSIV-3 | Detail |
| C2H2g00256 | 2:31,383,594-31,384,466 | - | C1H2g23003 | CX2g019099 | LOC_Os02g56400 | Os02g0807200 | - | Detail |
| C2H2g24117 | 2:31,384,811-31,385,032 | - | C1H2g11260 | CX2g020564 | LOC_Os02g56380 | Os02g0808100 | - | Detail |
| C2H2g08191 | 2:31,385,063-31,386,127 | - | C1H2g11260 | CX2g019099 | LOC_Os02g56420 | Os02g0808300 | - | Detail |
| C2H2g07924 | 2:31,386,586-31,389,321 | - | C1H2g13515 | CX2g020564 | LOC_Os02g56420 | Os02g0808300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |