| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g08219 | 12:18,094,177-18,094,797 | + | - | - | - | - | - | Detail |
| C2H12g27985 | 12:18,096,689-18,098,901 | + | C1H12g00936 | CX12g018573 | LOC_Os12g35550 | Os12g0540700 | - | Detail |
| C2H12g21794 | 12:18,100,180-18,105,637 | + | C1H12g23067 | CX12g016773 | LOC_Os12g35560 | Os12g0540800 | - | Detail |
| C2H12g01989 | 12:18,106,197-18,110,318 | - | C1H12g13037 | CX12g017008 | LOC_Os12g35570 | Os12g0540900 | - | Detail |
| C2H12g24684 | 12:18,111,616-18,112,521 | + | C1H12g12591 | CX12g016686 | LOC_Os12g35580 | Os12g0541000 | - | Detail |
| C2H12g14686 | 12:18,128,282-18,133,740 | + | C1H12g20137 | CX12g017105 | LOC_Os12g35610 | Os12g0541300 | RBOHH | Detail |
| C2H12g09003 | 12:18,135,014-18,138,406 | + | C1H12g28335 | - | LOC_Os12g35620 | Os12g0541400 | - | Detail |
| C2H12g21241 | 12:18,140,567-18,146,198 | + | C1H12g07197 | CX12g016516 | LOC_Os12g35630 | Os12g0541500 | - | Detail |
| C2H12g24487 | 12:18,146,138-18,149,309 | - | C1H12g29545 | CX12g015849 | LOC_Os12g35640 | - | - | Detail |
| C2H12g27814 | 12:18,167,946-18,168,329 | + | C1H12g16092 | - | LOC_Os12g35670 | Os12g0541700 | - | Detail |
| C2H12g19807 | 12:18,171,105-18,172,084 | + | C1H12g29994 | CX12g017578 | - | - | - | Detail |
| C2H12g23475 | 12:18,173,246-18,173,647 | + | C1H12g23461 | - | LOC_Os12g35690 | Os12g0542000 | - | Detail |
| C2H12g20611 | 12:18,179,149-18,180,529 | - | C1H12g07668 | CX12g018654 | LOC_Os12g35710 | Os12g0542200 | - | Detail |
| C2H12g12905 | 12:18,193,365-18,196,045 | + | - | - | - | Os12g0235200 | - | Detail |
| C2H12g25944 | 12:18,250,071-18,251,768 | + | C1H12g11734 | CX12g015941 | LOC_Os12g35890 | Os12g0543600 | - | Detail |
| C2H12g29188 | 12:18,256,078-18,257,882 | + | C1H12g22624 | CX12g017974 | LOC_Os12g36000 | Os12g0545400 | - | Detail |
| C2H12g19947 | 12:18,298,297-18,298,488 | + | - | - | - | - | - | Detail |
| C2H12g02354 | 12:18,311,812-18,312,324 | + | C1H12g21700 | CX12g015696 | LOC_Os12g36040 | Os12g0546800 | - | Detail |
| C2H12g15796 | 12:18,315,190-18,315,438 | + | C1H12g24246 | CX12g015696 | LOC_Os12g36040 | Os12g0546800 | - | Detail |
| C2H12g21748 | 12:18,365,935-18,372,498 | + | C1H12g01039 | CX12g018340 | LOC_Os12g36100 | Os12g0547500 | OsKCH1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |