| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g27506 | 6:2,837,533-2,838,097 | + | C1H6g17960 | CX6g041729 | - | - | - | Detail |
| C2H6g16420 | 6:2,850,644-2,852,146 | + | C1H6g19331 | CX6g044087 | LOC_Os06g07450 | Os06g0170866 | - | Detail |
| C2H6g11064 | 6:2,854,373-2,854,702 | + | C1H6g05846 | - | - | - | - | Detail |
| C2H6g12470 | 6:2,868,471-2,869,052 | + | - | CX6g045326 | LOC_Os06g07470 | Os06g0171500 | - | Detail |
| C2H6g12040 | 6:2,870,793-2,878,448 | - | C1H6g19224 | CX6g045600 | LOC_Os06g07474 | Os06g0171600 | - | Detail |
| C2H6g23378 | 6:2,878,719-2,880,475 | + | C1H6g18552 | CX6g042658 | LOC_Os06g07480 | Os06g0171700 | - | Detail |
| C2H6g24054 | 6:2,880,865-2,887,610 | - | C1H6g25044 | CX6g044064 | LOC_Os06g07490 | Os06g0171800 | - | Detail |
| C2H6g04632 | 6:2,890,445-2,897,166 | + | C1H6g16236 | CX6g042998 | LOC_Os06g07540 | Os06g0171900 | - | Detail |
| C2H6g18436 | 6:2,897,870-2,900,764 | + | C1H6g10657 | CX6g044733 | LOC_Os06g07550 | Os06g0172000 | - | Detail |
| C2H6g03204 | 6:2,907,092-2,907,799 | + | C1H6g08505 | CX6g045382 | LOC_Os06g07560 | Os06g0172200 | - | Detail |
| C2H6g06251 | 6:2,910,483-2,910,746 | + | C1H6g22975 | CX6g041584 | LOC_Os06g07580 | Os06g0172600 | - | Detail |
| C2H6g11115 | 6:2,928,887-2,932,329 | - | C1H6g28387 | CX6g045868 | LOC_Os06g07600 | Os06g0172800 | - | Detail |
| C2H6g28357 | 6:2,935,884-2,941,735 | + | C1H6g29081 | CX6g045385 | LOC_Os06g07620 | Os06g0173000 | - | Detail |
| C2H6g02209 | 6:2,943,784-2,948,442 | + | C1H6g24053 | CX6g043458 | LOC_Os06g07630 | Os06g0173100 | OsRpt5b | Detail |
| C2H6g14609 | 6:2,964,354-2,966,214 | - | C1H6g10438 | CX6g044658 | LOC_Os06g07700 | Os06g0173800 | - | Detail |
| C2H6g29331 | 6:2,987,280-2,989,272 | + | C1H6g24712 | CX6g041809 | LOC_Os06g07760 | Os06g0174300 | - | Detail |
| C2H6g13115 | 6:2,990,994-2,992,989 | + | C1H6g20008 | CX6g043121 | LOC_Os06g07770 | Os06g0174350 | - | Detail |
| C2H6g24511 | 6:2,996,113-3,002,335 | + | C1H6g25449 | CX6g043121 | LOC_Os06g07770 | Os06g0174375 | - | Detail |
| C2H6g26780 | 6:3,003,093-3,005,524 | - | C1H6g24998 | CX6g044484 | LOC_Os06g07780 | Os06g0174400 | - | Detail |
| C2H6g01504 | 6:3,009,091-3,009,282 | + | C1H6g18194 | - | LOC_Os06g07800 | Os06g0174900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |