| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06388 | 5:239,621-241,653 | - | C2H5g28590 | CX5g037105 | LOC_Os05g01460 | Os05g0104900 | - | Detail |
| C1H5g26578 | 5:241,669-241,863 | - | C2H5g05719 | - | LOC_Os05g01460 | Os05g0104900 | - | Detail |
| C1H5g15502 | 5:244,724-251,452 | - | C2H5g19730 | CX5g039500 | LOC_Os05g01470 | Os05g0105000 | - | Detail |
| C1H5g16617 | 5:254,952-255,242 | - | C2H5g26084 | CX5g039500 | LOC_Os05g01470 | Os05g0105050 | - | Detail |
| C1H5g16600 | 5:260,462-262,434 | + | C2H5g10354 | CX5g038808 | LOC_Os05g01480 | Os05g0105100 | - | Detail |
| C1H5g21241 | 5:262,996-265,882 | - | C2H5g19903 | CX5g039969 | LOC_Os05g01490 | Os05g0105200 | - | Detail |
| C1H5g18202 | 5:266,776-272,585 | + | C2H5g06326 | CX5g037023 | LOC_Os05g01500 | Os05g0105300 | - | Detail |
| C1H5g18772 | 5:276,848-278,912 | + | C2H5g11579 | CX5g037590 | LOC_Os05g01510 | Os05g0105500 | - | Detail |
| C1H5g25622 | 5:279,491-286,472 | - | C2H5g20280 | CX5g039765 | LOC_Os05g01520 | Os05g0105600 | - | Detail |
| C1H5g19196 | 5:287,940-288,826 | + | C2H5g02633 | - | LOC_Os05g01530 | Os05g0105800 | - | Detail |
| C1H5g01452 | 5:292,101-295,754 | + | C2H5g03024 | CX5g037960 | LOC_Os05g01540 | Os05g0105900 | OsSR45a | Detail |
| C1H5g05022 | 5:296,100-299,352 | - | C2H5g12749 | CX5g040576 | LOC_Os05g01550 | Os05g0106000 | - | Detail |
| C1H5g03893 | 5:300,774-304,253 | - | C2H11g21238 | CX5g037087 | LOC_Os05g01560 | Os05g0106100 | - | Detail |
| C1H5g16852 | 5:323,052-324,718 | + | C2H5g26492 | CX5g036731 | LOC_Os05g01570 | Os05g0106200 | - | Detail |
| C1H5g10447 | 5:329,510-331,487 | + | C2H5g17692 | CX5g039978 | LOC_Os05g01580 | Os05g0106300 | - | Detail |
| C1H5g13600 | 5:334,944-337,066 | + | C2H5g25349 | CX5g037306 | LOC_Os05g01590 | Os05g0106500 | - | Detail |
| C1H5g15826 | 5:337,507-339,933 | - | C2H5g17036 | CX5g038738 | LOC_Os05g01600 | Os05g0106600 | - | Detail |
| C1H5g29092 | 5:344,265-349,406 | + | C2H5g10782 | CX5g040890 | LOC_Os05g01610 | Os05g0106700 | - | Detail |
| C1H5g02832 | 5:350,175-351,892 | - | C2H5g23625 | CX5g037947 | LOC_Os05g01620 | Os05g0106800 | - | Detail |
| C1H5g31140 | 5:352,958-354,755 | - | C2H5g06027 | CX5g038077 | LOC_Os05g01635 | Os05g0107000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |