| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g28785 | 4:1,024,388-1,024,848 | + | C2H4g09543 | CX4g034434 | - | - | - | Detail |
| C1H4g09357 | 4:1,058,261-1,058,806 | - | - | - | - | - | - | Detail |
| C1H4g10999 | 4:1,138,864-1,141,413 | + | C2H4g26759 | CX4g035743 | LOC_Os04g02850 | Os04g0118700 | - | Detail |
| C1H4g30040 | 4:1,143,816-1,146,739 | + | C2H4g08504 | CX4g032342 | LOC_Os04g02860 | Os04g0118800 | - | Detail |
| C1H4g10566 | 4:1,149,207-1,153,087 | - | C2H4g11798 | CX4g034307 | LOC_Os04g02870 | Os04g0118900 | OsRS29 | Detail |
| C1H4g07456 | 4:1,153,995-1,155,126 | - | - | - | - | - | - | Detail |
| C1H4g26984 | 4:1,157,802-1,158,199 | + | C2H4g23600 | CX4g036463 | LOC_Os04g02880 | Os04g0119000 | - | Detail |
| C1H4g01097 | 4:1,161,480-1,165,063 | + | C2H4g06483 | CX4g034760 | LOC_Os04g02900 | Os04g0119400 | FLO19 | Detail |
| C1H4g24475 | 4:1,168,495-1,171,971 | - | C2H4g08482 | CX4g032462 | LOC_Os04g02910 | Os04g0119500 | - | Detail |
| C1H4g07943 | 4:1,178,994-1,185,441 | + | C2H4g19285 | CX4g031645 | LOC_Os04g02920 | Os04g0119800 | - | Detail |
| C1H4g25987 | 4:1,190,081-1,201,805 | + | C2H4g21106 | CX4g031516 | LOC_Os04g02970 | Os04g0120100 | - | Detail |
| C1H4g01619 | 4:1,208,599-1,210,610 | + | C2H4g08717 | CX4g032545 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C1H4g07856 | 4:1,213,250-1,217,224 | + | C2H4g29838 | CX4g032545 | LOC_Os04g02980 | Os04g0120300 | - | Detail |
| C1H4g16515 | 4:1,218,247-1,219,024 | + | C2H4g30144 | CX4g031516 | LOC_Os04g02980 | Os04g0120350 | - | Detail |
| C1H4g21533 | 4:1,238,633-1,249,050 | + | C2H4g04444 | CX4g034661 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C1H4g12053 | 4:1,251,803-1,257,155 | + | C2H4g12397 | CX4g032499 | LOC_Os04g03100 | Os04g0121300 | - | Detail |
| C1H4g15960 | 4:1,264,365-1,264,682 | + | C2H4g01070 | CX4g036276 | - | - | - | Detail |
| C1H4g21418 | 4:1,280,194-1,280,681 | + | C2H4g10665 | CX4g033795 | LOC_Os04g03164 | Os04g0121800 | - | Detail |
| C1H4g29860 | 4:1,293,976-1,295,639 | - | C2H4g05913 | CX4g034990 | LOC_Os04g03180 | Os04g0122000 | - | Detail |
| C1H4g15787 | 4:1,297,256-1,299,687 | - | C2H4g12847 | CX4g033551 | LOC_Os04g03210 | Os04g0122200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |