| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24870 | 1:38,133,777-38,135,067 | - | C2H1g29036 | CX1g003882 | LOC_Os01g74350 | Os01g0974800 | - | Detail |
| C1H1g25105 | 1:38,136,323-38,136,607 | - | C2H1g11687 | CX1g003190 | - | - | - | Detail |
| C1H1g11140 | 1:38,137,508-38,138,664 | - | C2H1g23261 | CX1g005588 | LOC_Os01g74370 | Os01g0975000 | - | Detail |
| C1H1g20453 | 1:38,142,873-38,143,890 | + | C2H1g00046 | CX1g004945 | LOC_Os01g74410 | Os01g0975300 | - | Detail |
| C1H1g20910 | 1:38,153,106-38,154,141 | + | - | - | - | - | - | Detail |
| C1H1g08219 | 1:38,157,516-38,158,145 | + | C2H1g01068 | CX1g003699 | LOC_Os01g74440 | Os01g0975800 | MADS79 | Detail |
| C1H1g02174 | 1:38,161,270-38,162,104 | - | C2H1g19458 | CX1g006077 | LOC_Os01g74450 | Os01g0975900 | - | Detail |
| C1H1g10248 | 1:38,165,217-38,170,708 | - | C2H1g03008 | CX1g006488 | LOC_Os01g74460 | Os01g0976000 | MON1 | Detail |
| C1H1g23123 | 1:38,171,490-38,179,527 | - | C2H1g29806 | CX1g006587 | LOC_Os01g74470 | Os01g0976100 | - | Detail |
| C1H1g19138 | 1:38,181,108-38,182,238 | - | C2H1g14975 | CX1g000916 | LOC_Os01g74480 | Os01g0976200 | - | Detail |
| C1H1g04013 | 1:38,186,232-38,186,858 | + | C2H1g05558 | CX1g003039 | LOC_Os01g74490 | Os01g0976300 | - | Detail |
| C1H1g31465 | 1:38,188,032-38,192,631 | + | C2H1g15344 | CX1g004080 | LOC_Os01g74500 | Os01g0976450 | - | Detail |
| C1H1g00111 | 1:38,193,283-38,196,868 | + | C2H1g17772 | CX1g003446 | LOC_Os01g74510 | Os01g0976500 | - | Detail |
| C1H1g31006 | 1:38,198,798-38,201,965 | - | C2H1g05896 | CX1g003902 | LOC_Os01g74520 | Os01g0976600 | - | Detail |
| C1H1g13528 | 1:38,204,043-38,207,368 | - | C2H1g11672 | CX1g001345 | LOC_Os01g74530 | Os01g0976700 | - | Detail |
| C1H1g28719 | 1:38,209,476-38,209,986 | - | C2H1g08596 | CX1g005337 | LOC_Os01g74540 | Os01g0976800 | GATA10 | Detail |
| C1H1g02636 | 1:38,212,307-38,216,056 | - | C2H1g27561 | CX1g006826 | LOC_Os01g74550 | Os01g0976900 | - | Detail |
| C1H1g11576 | 1:38,218,231-38,219,115 | + | C2H1g13292 | CX1g000198 | LOC_Os01g74570 | Os01g0977100 | OsTET1 | Detail |
| C1H1g05726 | 1:38,221,483-38,225,848 | + | C2H1g13292 | CX1g000198 | LOC_Os01g74580 | Os01g0977200 | - | Detail |
| C1H1g30613 | 1:38,226,471-38,227,208 | - | C2H1g02664 | CX1g001561 | LOC_Os01g74590 | Os01g0977300 | Os2R_MYB20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029111 | 3:30,854,528-30,856,339 | + | C1H3g04338 | C2H3g04652 | LOC_Os03g58100 | Os03g0795200 | - | Detail |
| CX3g026410 | 3:30,859,648-30,861,051 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| CX3g026927 | 3:30,867,335-30,869,506 | + | C1H3g17508 | C2H3g24120 | LOC_Os03g58120 | Os03g0795400 | - | Detail |
| CX3g026673 | 3:30,872,446-30,875,287 | + | C1H3g15891 | C2H3g27733 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| CX3g029982 | 3:30,875,928-30,877,964 | - | C1H3g05639 | C2H3g00892 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| CX3g025433 | 3:30,880,335-30,882,312 | - | C1H3g16443 | C2H3g02014 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| CX3g029604 | 3:30,883,397-30,885,649 | + | C1H3g00668 | C2H3g19484 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| CX3g025208 | 3:30,893,123-30,893,638 | + | - | - | - | - | - | Detail |
| CX3g030752 | 3:30,893,887-30,895,464 | - | C1H3g16112 | - | - | Os03g0157000 | - | Detail |
| CX3g029140 | 3:30,898,060-30,899,786 | + | C1H3g06155 | C2H3g08936 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| CX3g025951 | 3:30,912,231-30,912,422 | - | - | - | - | - | - | Detail |
| CX3g029920 | 3:30,918,742-30,919,245 | - | C1H3g22799 | C2H3g19170 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| CX3g028585 | 3:30,920,046-30,921,363 | - | C1H3g12446 | C2H3g21611 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| CX3g026109 | 3:30,924,908-30,927,050 | - | C1H3g01827 | C2H3g18356 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| CX3g025705 | 3:30,937,822-30,938,154 | + | C1H3g26452 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX3g026507 | 3:30,939,965-30,942,360 | + | C1H3g31311 | C2H3g24067 | LOC_Os06g36530 | - | - | Detail |
| CX3g028055 | 3:30,946,538-30,946,741 | - | - | - | - | - | - | Detail |
| CX3g027699 | 3:30,957,417-30,958,858 | + | C1H3g10470 | C2H3g06838 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| CX3g028335 | 3:30,965,730-30,966,529 | + | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g029778 | 3:30,967,817-30,968,014 | - | - | - | - | - | - | Detail |