| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g30163 | 2:29,927,209-29,927,691 | - | - | CX2g024380 | LOC_Os02g53510 | Os02g0775300 | - | Detail |
| C2H2g19841 | 2:29,929,072-29,938,854 | - | C1H2g29744 | CX2g019424 | LOC_Os02g53520 | Os02g0775400 | K16 | Detail |
| C2H2g14863 | 2:29,949,729-29,950,565 | - | C1H2g06188 | CX2g023447 | LOC_Os02g53530 | Os02g0775600 | - | Detail |
| C2H2g00181 | 2:29,965,870-29,966,031 | - | C1H2g17972 | CX2g023640 | LOC_Os02g53580 | Os02g0775900 | - | Detail |
| C2H2g15784 | 2:29,967,795-29,968,133 | - | C1H2g14913 | CX2g023640 | LOC_Os02g53580 | Os02g0775900 | - | Detail |
| C2H2g13738 | 2:29,971,693-29,972,070 | - | - | CX2g023854 | LOC_Os02g53600 | - | - | Detail |
| C2H2g14687 | 2:29,977,736-29,981,604 | - | C1H2g00649 | CX2g021737 | LOC_Os02g53620 | Os02g0776400 | OsNF-YA11 | Detail |
| C2H2g20543 | 2:29,987,824-29,988,738 | - | - | CX2g022499 | LOC_Os02g53660 | Os02g0776600 | - | Detail |
| C2H2g18316 | 2:29,992,531-29,997,342 | + | C1H2g09960 | CX2g020408 | LOC_Os02g53670 | Os02g0776700 | - | Detail |
| C2H2g00569 | 2:29,997,512-30,001,336 | - | C1H2g17006 | CX2g019149 | LOC_Os02g53680 | Os02g0776800 | - | Detail |
| C2H2g17721 | 2:30,004,314-30,006,294 | - | C1H2g31437 | CX2g021217 | LOC_Os02g53690 | Os02g0776900 | - | Detail |
| C2H2g26729 | 2:30,017,892-30,030,161 | - | C1H2g17671 | CX2g024173 | LOC_Os02g53700 | Os02g0777100 | - | Detail |
| C2H2g23360 | 2:30,036,764-30,038,493 | - | - | - | - | - | - | Detail |
| C2H2g10741 | 2:30,041,411-30,048,695 | + | C1H2g07904 | CX2g022446 | LOC_Os02g53720 | Os02g0777400 | OsER2 | Detail |
| C2H2g16530 | 2:30,053,275-30,070,706 | + | C1H2g13209 | CX2g020126 | LOC_Os02g53740 | Os02g0777700 | - | Detail |
| C2H2g28341 | 2:30,071,290-30,074,428 | - | C1H2g24043 | CX2g020656 | LOC_Os02g53750 | Os02g0777800 | - | Detail |
| C2H2g04031 | 2:30,087,823-30,098,890 | + | C1H2g30598 | CX2g022211 | - | - | - | Detail |
| C2H2g14178 | 2:30,099,550-30,104,659 | + | C1H2g05624 | CX2g020461 | LOC_Os02g53780 | Os02g0778300 | - | Detail |
| C2H2g03176 | 2:30,105,456-30,108,687 | + | C1H2g30218 | CX2g023034 | LOC_Os02g53790 | Os02g0778400 | - | Detail |
| C2H2g08933 | 2:30,110,899-30,114,857 | + | C1H2g22636 | CX2g023710 | LOC_Os02g53810 | Os02g0778500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006793 | 1:17,745,225-17,760,762 | + | C1H1g28687 | C2H1g06550 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| CX1g000241 | 1:17,762,454-17,767,421 | - | C1H1g03628 | C2H1g06422 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| CX1g004192 | 1:17,772,168-17,776,754 | - | C1H1g18093 | C2H1g29503 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| CX1g007113 | 1:17,779,493-17,790,799 | + | C1H1g30321 | C2H1g02847 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| CX1g005291 | 1:17,804,962-17,809,055 | + | C1H1g07483 | C2H1g18148 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| CX1g001971 | 1:17,815,311-17,816,138 | + | C1H1g28876 | C2H1g18703 | - | Os01g0882200 | - | Detail |
| CX1g005885 | 1:17,843,810-17,845,258 | + | C1H1g05853 | C2H1g19557 | LOC_Os01g34560 | Os01g0529800 | OsCUT1 | Detail |
| CX1g007129 | 1:17,860,972-17,863,666 | + | C1H1g30939 | C2H1g14328 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| CX1g002051 | 1:17,873,805-17,875,135 | + | C1H1g13045 | C2H1g14488 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| CX1g001298 | 1:17,876,258-17,876,467 | + | - | - | - | - | - | Detail |
| CX1g004370 | 1:17,878,597-17,879,775 | - | - | - | LOC_Os01g34630 | Os01g0530500 | - | Detail |
| CX1g000818 | 1:17,885,910-17,888,699 | - | C1H1g29511 | C2H1g28456 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| CX1g003349 | 1:17,895,148-17,899,020 | + | C1H1g12081 | C2H1g17879 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| CX1g005955 | 1:17,911,956-17,924,410 | - | C1H1g13242 | C2H1g21275 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| CX1g005264 | 1:17,940,822-17,941,583 | - | - | - | LOC_Os01g34790 | Os01g0532300 | - | Detail |
| CX1g006290 | 1:17,952,340-17,952,531 | + | - | - | - | - | - | Detail |
| CX1g001102 | 1:17,969,340-17,970,044 | - | C1H6g30798 | - | LOC_Os01g34860 | - | - | Detail |
| CX1g001883 | 1:17,984,405-17,991,041 | + | C1H1g30653 | C2H1g04710 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| CX1g006242 | 1:17,992,463-18,014,345 | - | C1H1g08964 | C2H1g21809 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| CX1g002715 | 1:18,018,494-18,020,523 | - | - | - | LOC_Os01g34910 | - | - | Detail |