| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g21950 | 1:5,156,758-5,157,543 | + | C1H1g18999 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C2H1g18529 | 1:5,160,262-5,161,059 | + | C1H1g20276 | CX1g000352 | LOC_Os01g10970 | Os01g0207700 | - | Detail |
| C2H1g21935 | 1:5,168,402-5,169,870 | + | C1H1g26781 | CX1g005883 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C2H1g29674 | 1:5,174,437-5,175,988 | + | C1H1g25464 | CX1g005883 | LOC_Os01g10990 | Os01g0208000 | - | Detail |
| C2H1g12071 | 1:5,186,164-5,186,724 | + | C1H1g11853 | CX1g000352 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C2H1g11638 | 1:5,192,462-5,194,292 | - | C1H1g01947 | CX1g006210 | LOC_Os01g11010 | Os01g0208400 | - | Detail |
| C2H1g19708 | 1:5,203,767-5,211,532 | + | C1H1g28948 | CX1g005878 | LOC_Os01g11040 | Os01g0208600 | - | Detail |
| C2H1g22516 | 1:5,212,892-5,217,652 | + | C1H1g05716 | CX1g006828 | LOC_Os01g11054 | Os01g0208700 | Osppc4 | Detail |
| C2H1g01505 | 1:5,218,131-5,223,233 | + | C1H1g21624 | CX1g004331 | LOC_Os01g11070 | Os01g0209000 | - | Detail |
| C2H1g10245 | 1:5,227,727-5,231,459 | + | C1H1g24219 | CX1g001114 | LOC_Os01g11110 | Os01g0209200 | - | Detail |
| C2H1g07094 | 1:5,231,618-5,236,545 | - | C1H1g03677 | CX1g001003 | LOC_Os01g11120 | Os01g0209400 | - | Detail |
| C2H1g19634 | 1:5,242,085-5,249,423 | - | C1H1g12202 | CX1g000194 | LOC_Os01g11130 | Os01g0209500 | - | Detail |
| C2H1g00003 | 1:5,261,349-5,262,402 | - | C1H1g22199 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C2H1g07361 | 1:5,264,392-5,264,793 | - | C1H1g22199 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C2H1g04035 | 1:5,276,105-5,278,402 | - | C1H1g04985 | CX1g004758 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| C2H1g14710 | 1:5,282,482-5,282,839 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H1g16459 | 1:5,288,709-5,289,299 | - | C1H1g14003 | CX1g006771 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| C2H1g10978 | 1:5,297,332-5,298,543 | + | C1H1g27615 | CX1g001982 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| C2H1g29549 | 1:5,298,821-5,300,947 | - | C1H1g05366 | CX1g004173 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| C2H1g12111 | 1:5,301,923-5,302,737 | - | C1H1g22960 | CX1g001527 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006793 | 1:17,745,225-17,760,762 | + | C1H1g28687 | C2H1g06550 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| CX1g000241 | 1:17,762,454-17,767,421 | - | C1H1g03628 | C2H1g06422 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| CX1g004192 | 1:17,772,168-17,776,754 | - | C1H1g18093 | C2H1g29503 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| CX1g007113 | 1:17,779,493-17,790,799 | + | C1H1g30321 | C2H1g02847 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| CX1g005291 | 1:17,804,962-17,809,055 | + | C1H1g07483 | C2H1g18148 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| CX1g001971 | 1:17,815,311-17,816,138 | + | C1H1g28876 | C2H1g18703 | - | Os01g0882200 | - | Detail |
| CX1g005885 | 1:17,843,810-17,845,258 | + | C1H1g05853 | C2H1g19557 | LOC_Os01g34560 | Os01g0529800 | OsCUT1 | Detail |
| CX1g007129 | 1:17,860,972-17,863,666 | + | C1H1g30939 | C2H1g14328 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| CX1g002051 | 1:17,873,805-17,875,135 | + | C1H1g13045 | C2H1g14488 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| CX1g001298 | 1:17,876,258-17,876,467 | + | - | - | - | - | - | Detail |
| CX1g004370 | 1:17,878,597-17,879,775 | - | - | - | LOC_Os01g34630 | Os01g0530500 | - | Detail |
| CX1g000818 | 1:17,885,910-17,888,699 | - | C1H1g29511 | C2H1g28456 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| CX1g003349 | 1:17,895,148-17,899,020 | + | C1H1g12081 | C2H1g17879 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| CX1g005955 | 1:17,911,956-17,924,410 | - | C1H1g13242 | C2H1g21275 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| CX1g005264 | 1:17,940,822-17,941,583 | - | - | - | LOC_Os01g34790 | Os01g0532300 | - | Detail |
| CX1g006290 | 1:17,952,340-17,952,531 | + | - | - | - | - | - | Detail |
| CX1g001102 | 1:17,969,340-17,970,044 | - | C1H6g30798 | - | LOC_Os01g34860 | - | - | Detail |
| CX1g001883 | 1:17,984,405-17,991,041 | + | C1H1g30653 | C2H1g04710 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| CX1g006242 | 1:17,992,463-18,014,345 | - | C1H1g08964 | C2H1g21809 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| CX1g002715 | 1:18,018,494-18,020,523 | - | - | - | LOC_Os01g34910 | - | - | Detail |