| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g27838 | 2:796,647-798,098 | + | C2H2g07816 | CX2g022255 | LOC_Os02g02550 | Os02g0117600 | - | Detail |
| C1H2g18994 | 2:798,455-800,921 | - | C2H2g13889 | CX2g022630 | LOC_Os02g02560 | Os02g0117700 | UGP2, Ugp2, OsUgp2 | Detail |
| C1H2g27291 | 2:801,105-801,991 | - | C2H2g01328 | CX2g022630 | LOC_Os02g02560 | Os02g0117700 | UGP2, Ugp2, OsUgp2 | Detail |
| C1H2g13917 | 2:802,381-805,468 | - | C2H2g04865 | CX2g020750 | LOC_Os02g02570 | Os02g0117800 | - | Detail |
| C1H2g28901 | 2:805,971-808,822 | - | C2H2g03572 | CX2g021321 | LOC_Os02g02580 | Os02g0117900 | - | Detail |
| C1H2g26410 | 2:809,559-812,519 | - | C2H2g23604 | CX2g020200 | LOC_Os02g02590 | Os02g0118000 | - | Detail |
| C1H2g14131 | 2:820,789-824,437 | + | C2H2g20482 | CX2g022002 | LOC_Os02g02600 | Os02g0118200 | - | Detail |
| C1H2g21041 | 2:826,527-829,953 | + | C2H2g03661 | CX2g023780 | LOC_Os02g02620 | Os02g0118400 | - | Detail |
| C1H2g21408 | 2:830,415-830,857 | - | C2H2g07812 | CX2g023981 | LOC_Os02g02630 | Os02g0118500 | - | Detail |
| C1H2g27073 | 2:832,541-837,405 | + | C2H2g03830 | CX2g020837 | LOC_Os02g02670 | Os02g0118875 | - | Detail |
| C1H2g28724 | 2:840,082-841,044 | + | C2H2g06996 | CX2g023953 | LOC_Os02g02660 | Os02g0262800 | - | Detail |
| C1H2g13836 | 2:854,266-856,239 | + | C2H2g29328 | CX2g023953 | LOC_Os02g02660 | Os02g0118800 | - | Detail |
| C1H2g31106 | 2:861,749-867,137 | + | C2H2g29016 | CX2g023953 | LOC_Os02g02670 | Os02g0118875 | - | Detail |
| C1H2g06717 | 2:869,778-873,137 | - | C2H2g24393 | CX2g020574 | LOC_Os02g02690 | Os02g0119100 | - | Detail |
| C1H2g11285 | 2:875,532-877,737 | + | C2H2g13062 | CX2g021766 | LOC_Os02g02700 | Os02g0119200 | - | Detail |
| C1H2g31576 | 2:879,580-884,104 | + | C2H2g01999 | CX2g021571 | LOC_Os02g02710 | Os02g0119300 | - | Detail |
| C1H2g05266 | 2:884,483-886,524 | - | C2H2g01380 | CX2g022479 | LOC_Os02g02720 | Os02g0119400 | - | Detail |
| C1H2g20562 | 2:891,687-895,933 | + | C2H2g12007 | CX2g024691 | LOC_Os02g02730 | Os02g0119600 | - | Detail |
| C1H2g10614 | 2:900,512-901,612 | - | C2H2g25346 | CX2g024210 | LOC_Os02g02740 | Os02g0119700 | - | Detail |
| C1H2g24600 | 2:902,750-907,951 | + | C2H2g25669 | CX2g022368 | LOC_Os02g02750 | Os02g0119800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006793 | 1:17,745,225-17,760,762 | + | C1H1g28687 | C2H1g06550 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| CX1g000241 | 1:17,762,454-17,767,421 | - | C1H1g03628 | C2H1g06422 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| CX1g004192 | 1:17,772,168-17,776,754 | - | C1H1g18093 | C2H1g29503 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| CX1g007113 | 1:17,779,493-17,790,799 | + | C1H1g30321 | C2H1g02847 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| CX1g005291 | 1:17,804,962-17,809,055 | + | C1H1g07483 | C2H1g18148 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| CX1g001971 | 1:17,815,311-17,816,138 | + | C1H1g28876 | C2H1g18703 | - | Os01g0882200 | - | Detail |
| CX1g005885 | 1:17,843,810-17,845,258 | + | C1H1g05853 | C2H1g19557 | LOC_Os01g34560 | Os01g0529800 | OsCUT1 | Detail |
| CX1g007129 | 1:17,860,972-17,863,666 | + | C1H1g30939 | C2H1g14328 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| CX1g002051 | 1:17,873,805-17,875,135 | + | C1H1g13045 | C2H1g14488 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| CX1g001298 | 1:17,876,258-17,876,467 | + | - | - | - | - | - | Detail |
| CX1g004370 | 1:17,878,597-17,879,775 | - | - | - | LOC_Os01g34630 | Os01g0530500 | - | Detail |
| CX1g000818 | 1:17,885,910-17,888,699 | - | C1H1g29511 | C2H1g28456 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| CX1g003349 | 1:17,895,148-17,899,020 | + | C1H1g12081 | C2H1g17879 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| CX1g005955 | 1:17,911,956-17,924,410 | - | C1H1g13242 | C2H1g21275 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| CX1g005264 | 1:17,940,822-17,941,583 | - | - | - | LOC_Os01g34790 | Os01g0532300 | - | Detail |
| CX1g006290 | 1:17,952,340-17,952,531 | + | - | - | - | - | - | Detail |
| CX1g001102 | 1:17,969,340-17,970,044 | - | C1H6g30798 | - | LOC_Os01g34860 | - | - | Detail |
| CX1g001883 | 1:17,984,405-17,991,041 | + | C1H1g30653 | C2H1g04710 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| CX1g006242 | 1:17,992,463-18,014,345 | - | C1H1g08964 | C2H1g21809 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| CX1g002715 | 1:18,018,494-18,020,523 | - | - | - | LOC_Os01g34910 | - | - | Detail |