| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14223 | 12:16,654,510-16,655,973 | + | C2H12g16950 | CX12g017413 | LOC_Os12g32380 | Os12g0508300 | - | Detail |
| C1H12g04208 | 12:16,664,823-16,667,718 | + | C2H12g15579 | CX12g015589 | LOC_Os12g32390 | Os12g0508400 | - | Detail |
| C1H12g20034 | 12:16,670,612-16,671,628 | + | C2H12g17897 | CX12g015589 | LOC_Os12g32400 | Os12g0508500 | OsbHLH133 | Detail |
| C1H12g01026 | 12:16,674,395-16,674,772 | - | C2H12g05290 | CX12g016543 | - | - | - | Detail |
| C1H12g18134 | 12:16,699,662-16,701,889 | - | C2H12g28152 | - | LOC_Os12g32580 | - | - | Detail |
| C1H12g03703 | 12:16,707,990-16,709,113 | + | C2H12g26520 | CX12g016850 | - | - | - | Detail |
| C1H12g21922 | 12:16,717,076-16,717,663 | - | C2H12g14514 | CX12g017324 | LOC_Os12g32610 | Os12g0510750 | OsSMP2 | Detail |
| C1H12g07006 | 12:16,724,311-16,726,237 | + | C2H12g23023 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C1H12g03851 | 12:16,728,882-16,731,557 | - | C2H12g01778 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C1H12g10988 | 12:16,735,500-16,738,577 | + | C2H12g29019 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C1H12g02725 | 12:16,740,629-16,743,267 | + | C2H12g27722 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C1H12g25225 | 12:16,744,410-16,749,593 | - | C2H12g10634 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C1H12g13852 | 12:16,765,611-16,766,183 | + | - | - | - | - | - | Detail |
| C1H12g00024 | 12:16,767,555-16,771,769 | - | C2H12g02344 | CX12g015919 | LOC_Os12g32670 | Os12g0511500 | - | Detail |
| C1H12g02230 | 12:16,796,008-16,803,454 | + | C2H12g11130 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C1H12g03710 | 12:16,805,333-16,808,517 | - | C2H12g25999 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C1H12g17769 | 12:16,819,510-16,828,462 | - | C2H12g03027 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g27986 | 12:16,842,724-16,845,399 | - | C2H12g05645 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C1H12g26954 | 12:16,866,690-16,867,964 | - | C2H12g07164 | CX12g018119 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C1H12g12598 | 12:16,884,466-16,884,777 | + | - | CX1g002184 | LOC_Os10g20310 | Os10g0343900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006793 | 1:17,745,225-17,760,762 | + | C1H1g28687 | C2H1g06550 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| CX1g000241 | 1:17,762,454-17,767,421 | - | C1H1g03628 | C2H1g06422 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| CX1g004192 | 1:17,772,168-17,776,754 | - | C1H1g18093 | C2H1g29503 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| CX1g007113 | 1:17,779,493-17,790,799 | + | C1H1g30321 | C2H1g02847 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| CX1g005291 | 1:17,804,962-17,809,055 | + | C1H1g07483 | C2H1g18148 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| CX1g001971 | 1:17,815,311-17,816,138 | + | C1H1g28876 | C2H1g18703 | - | Os01g0882200 | - | Detail |
| CX1g005885 | 1:17,843,810-17,845,258 | + | C1H1g05853 | C2H1g19557 | LOC_Os01g34560 | Os01g0529800 | OsCUT1 | Detail |
| CX1g007129 | 1:17,860,972-17,863,666 | + | C1H1g30939 | C2H1g14328 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| CX1g002051 | 1:17,873,805-17,875,135 | + | C1H1g13045 | C2H1g14488 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| CX1g001298 | 1:17,876,258-17,876,467 | + | - | - | - | - | - | Detail |
| CX1g004370 | 1:17,878,597-17,879,775 | - | - | - | LOC_Os01g34630 | Os01g0530500 | - | Detail |
| CX1g000818 | 1:17,885,910-17,888,699 | - | C1H1g29511 | C2H1g28456 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| CX1g003349 | 1:17,895,148-17,899,020 | + | C1H1g12081 | C2H1g17879 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| CX1g005955 | 1:17,911,956-17,924,410 | - | C1H1g13242 | C2H1g21275 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| CX1g005264 | 1:17,940,822-17,941,583 | - | - | - | LOC_Os01g34790 | Os01g0532300 | - | Detail |
| CX1g006290 | 1:17,952,340-17,952,531 | + | - | - | - | - | - | Detail |
| CX1g001102 | 1:17,969,340-17,970,044 | - | C1H6g30798 | - | LOC_Os01g34860 | - | - | Detail |
| CX1g001883 | 1:17,984,405-17,991,041 | + | C1H1g30653 | C2H1g04710 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| CX1g006242 | 1:17,992,463-18,014,345 | - | C1H1g08964 | C2H1g21809 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| CX1g002715 | 1:18,018,494-18,020,523 | - | - | - | LOC_Os01g34910 | - | - | Detail |