| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10728 | 9:16,830,371-16,832,276 | + | C2H9g26463 | CX9g055900 | LOC_Os09g34230 | Os09g0518000 | OsUGT74H4 | Detail |
| C1H9g19198 | 9:16,838,064-16,839,569 | + | C2H9g02520 | CX9g054966 | LOC_Os09g34250 | Os09g0518200 | OsSGT1 | Detail |
| C1H9g30947 | 9:16,844,284-16,845,772 | + | C2H9g22734 | CX9g055928 | LOC_Os09g34270 | Os09g0518400 | - | Detail |
| C1H9g09147 | 9:16,852,135-16,856,191 | + | C2H9g08049 | CX9g055676 | LOC_Os09g34280 | Os09g0518500 | - | Detail |
| C1H9g05389 | 9:16,857,063-16,858,689 | - | C2H9g03145 | CX9g056764 | LOC_Os09g34290 | Os09g0518600 | - | Detail |
| C1H9g00022 | 9:16,859,212-16,863,946 | - | C2H9g00047 | CX9g055254 | LOC_Os09g34300 | Os09g0518700 | - | Detail |
| C1H9g22729 | 9:16,866,758-16,867,299 | + | C2H9g05387 | CX9g057932 | LOC_Os09g34310 | - | - | Detail |
| C1H9g23239 | 9:16,872,391-16,873,428 | - | - | CX9g056160 | LOC_Os09g34320 | Os09g0518900 | - | Detail |
| C1H9g17507 | 9:16,882,934-16,883,785 | - | C2H9g03669 | CX9g055953 | LOC_Os09g34330 | Os09g0519100 | - | Detail |
| C1H9g15652 | 9:16,900,586-16,901,373 | - | C2H9g27958 | - | - | - | - | Detail |
| C1H9g11494 | 9:16,902,311-16,902,511 | - | C2H1g00715 | CX9g055320 | LOC_Os12g03160 | - | - | Detail |
| C1H9g20303 | 9:16,915,583-16,916,061 | - | C2H9g09976 | CX9g055247 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| C1H9g03744 | 9:16,920,848-16,923,558 | + | C2H9g00711 | CX9g055700 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| C1H9g28676 | 9:16,924,601-16,926,496 | + | C2H9g07064 | CX9g057087 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| C1H9g02310 | 9:16,929,155-16,932,585 | + | C2H9g21344 | CX9g057384 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| C1H9g04530 | 9:16,933,479-16,934,397 | - | C2H9g01771 | CX9g055638 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| C1H9g24828 | 9:16,939,968-16,941,371 | + | C2H9g21190 | CX9g056986 | LOC_Os09g32780 | - | - | Detail |
| C1H9g25767 | 9:16,944,020-16,947,414 | - | C2H9g04653 | CX9g055686 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| C1H9g15041 | 9:16,949,494-16,953,854 | + | C2H9g24414 | CX9g058165 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| C1H9g08027 | 9:16,955,910-16,957,580 | - | C2H9g26435 | CX9g057097 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006793 | 1:17,745,225-17,760,762 | + | C1H1g28687 | C2H1g06550 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| CX1g000241 | 1:17,762,454-17,767,421 | - | C1H1g03628 | C2H1g06422 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| CX1g004192 | 1:17,772,168-17,776,754 | - | C1H1g18093 | C2H1g29503 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| CX1g007113 | 1:17,779,493-17,790,799 | + | C1H1g30321 | C2H1g02847 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| CX1g005291 | 1:17,804,962-17,809,055 | + | C1H1g07483 | C2H1g18148 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| CX1g001971 | 1:17,815,311-17,816,138 | + | C1H1g28876 | C2H1g18703 | - | Os01g0882200 | - | Detail |
| CX1g005885 | 1:17,843,810-17,845,258 | + | C1H1g05853 | C2H1g19557 | LOC_Os01g34560 | Os01g0529800 | OsCUT1 | Detail |
| CX1g007129 | 1:17,860,972-17,863,666 | + | C1H1g30939 | C2H1g14328 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| CX1g002051 | 1:17,873,805-17,875,135 | + | C1H1g13045 | C2H1g14488 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| CX1g001298 | 1:17,876,258-17,876,467 | + | - | - | - | - | - | Detail |
| CX1g004370 | 1:17,878,597-17,879,775 | - | - | - | LOC_Os01g34630 | Os01g0530500 | - | Detail |
| CX1g000818 | 1:17,885,910-17,888,699 | - | C1H1g29511 | C2H1g28456 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| CX1g003349 | 1:17,895,148-17,899,020 | + | C1H1g12081 | C2H1g17879 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| CX1g005955 | 1:17,911,956-17,924,410 | - | C1H1g13242 | C2H1g21275 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| CX1g005264 | 1:17,940,822-17,941,583 | - | - | - | LOC_Os01g34790 | Os01g0532300 | - | Detail |
| CX1g006290 | 1:17,952,340-17,952,531 | + | - | - | - | - | - | Detail |
| CX1g001102 | 1:17,969,340-17,970,044 | - | C1H6g30798 | - | LOC_Os01g34860 | - | - | Detail |
| CX1g001883 | 1:17,984,405-17,991,041 | + | C1H1g30653 | C2H1g04710 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| CX1g006242 | 1:17,992,463-18,014,345 | - | C1H1g08964 | C2H1g21809 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| CX1g002715 | 1:18,018,494-18,020,523 | - | - | - | LOC_Os01g34910 | - | - | Detail |