| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g08973 | 2:29,486,516-29,488,110 | - | C2H2g29404 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C1H2g26635 | 2:29,491,640-29,492,317 | - | C2H2g24763 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C1H2g13987 | 2:29,492,995-29,498,859 | - | C2H2g20003 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C1H2g23770 | 2:29,505,104-29,506,173 | + | C2H2g16702 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C1H2g16420 | 2:29,508,096-29,513,216 | - | C2H2g14916 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| C1H2g22906 | 2:29,514,765-29,516,017 | - | C2H2g08910 | CX2g023223 | LOC_Os02g52800 | - | - | Detail |
| C1H2g21062 | 2:29,516,257-29,516,906 | - | C2H2g30296 | CX2g023223 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| C1H2g20452 | 2:29,517,910-29,525,678 | - | C2H2g10227 | CX2g024302 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| C1H2g09699 | 2:29,529,136-29,533,815 | + | C2H2g03870 | CX2g022681 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| C1H2g10695 | 2:29,534,390-29,537,933 | - | C2H2g04249 | CX2g018835 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| C1H2g17405 | 2:29,546,391-29,546,630 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g09946 | 2:29,546,636-29,547,570 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g24330 | 2:29,548,613-29,551,351 | - | C2H2g22142 | CX2g019076 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| C1H2g03367 | 2:29,554,780-29,558,698 | - | C2H2g08643 | CX2g023311 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| C1H2g00086 | 2:29,560,116-29,561,132 | + | C2H2g01609 | CX2g020134 | LOC_Os02g52870 | Os02g0767600 | - | Detail |
| C1H2g22835 | 2:29,561,938-29,565,873 | - | C2H2g28311 | CX2g019177 | LOC_Os02g52880 | Os02g0767700 | - | Detail |
| C1H2g13024 | 2:29,586,012-29,586,637 | + | C2H2g16642 | CX2g020174 | LOC_Os02g52900 | Os02g0767900 | - | Detail |
| C1H2g31571 | 2:29,588,716-29,590,374 | - | C2H2g15864 | CX2g023130 | LOC_Os02g52910 | Os02g0768000 | - | Detail |
| C1H2g24818 | 2:29,591,237-29,593,905 | - | C2H2g21836 | CX2g024813 | LOC_Os02g52920 | Os02g0768200 | - | Detail |
| C1H2g14907 | 2:29,596,790-29,599,243 | - | C2H2g10491 | CX2g021956 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029789 | 3:30,605,484-30,607,682 | - | C1H3g02916 | C2H3g11681 | LOC_Os03g57490 | Os03g0788700 | - | Detail |
| CX3g025061 | 3:30,609,072-30,611,842 | - | C1H3g14412 | C2H3g01053 | LOC_Os03g57500 | Os03g0788800 | - | Detail |
| CX3g026284 | 3:30,616,733-30,620,108 | - | C1H3g20374 | C2H3g08306 | LOC_Os03g57510 | Os03g0789000 | OsCPK11 | Detail |
| CX3g026112 | 3:30,622,794-30,623,264 | + | - | - | LOC_Os03g57520 | Os03g0789100 | OsVQ14 | Detail |
| CX3g025673 | 3:30,625,039-30,626,933 | - | C1H3g27441 | C2H3g21152 | LOC_Os03g57530 | Os03g0789200 | - | Detail |
| CX3g028279 | 3:30,646,596-30,647,624 | + | C1H3g11521 | C2H3g22413 | LOC_Os03g57640 | Os03g0790500 | - | Detail |
| CX3g027319 | 3:30,652,813-30,653,337 | - | C1H3g01724 | - | - | - | - | Detail |
| CX3g025470 | 3:30,653,029-30,653,445 | + | - | - | - | - | - | Detail |
| CX3g027159 | 3:30,662,806-30,670,220 | + | C1H3g05168 | C2H3g25100 | LOC_Os03g57660 | Os03g0790600 | - | Detail |
| CX3g025144 | 3:30,673,362-30,674,598 | + | C1H3g25796 | C2H3g02735 | LOC_Os03g57670 | Os03g0287400 | - | Detail |
| CX3g027496 | 3:30,675,073-30,683,047 | - | C1H3g12742 | C2H3g18816 | LOC_Os03g57680 | Os03g0790700 | - | Detail |
| CX3g030157 | 3:30,684,885-30,691,977 | - | C1H3g06993 | C2H3g15282 | LOC_Os03g57690 | Os03g0790900 | - | Detail |
| CX3g024960 | 3:30,697,144-30,697,314 | - | - | - | - | - | - | Detail |
| CX3g027509 | 3:30,703,244-30,703,747 | + | C1H3g17242 | C2H3g05171 | LOC_Os03g57730 | Os03g0791300 | - | Detail |
| CX3g026538 | 3:30,704,907-30,705,549 | - | C1H3g26562 | C2H3g06575 | LOC_Os03g57740 | Os03g0791366 | - | Detail |
| CX3g027970 | 3:30,707,420-30,707,935 | + | - | - | LOC_Os03g57750 | Os03g0791432 | - | Detail |
| CX3g027735 | 3:30,709,233-30,713,980 | - | C1H3g19140 | C2H3g19278 | LOC_Os03g57760 | Os03g0791500 | - | Detail |
| CX3g026148 | 3:30,721,728-30,725,311 | + | C1H3g21231 | C2H3g14760 | LOC_Os03g57780 | Os03g0791700 | - | Detail |
| CX3g026973 | 3:30,725,932-30,731,826 | - | C1H3g19040 | C2H3g30214 | LOC_Os03g57790 | Os03g0791800 | OsRad6 | Detail |
| CX3g026990 | 3:30,733,438-30,733,659 | - | - | - | - | Os03g0576600 | OsACBP3 | Detail |