| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24892 | 4:30,303,858-30,305,905 | - | C2H4g08572 | CX4g035752 | LOC_Os04g57880 | Os04g0675400 | - | Detail |
| C1H4g08555 | 4:30,307,760-30,327,090 | - | C2H4g13536 | CX4g033430 | - | Os04g0675300 | - | Detail |
| C1H4g02276 | 4:30,328,851-30,332,158 | + | - | - | - | - | - | Detail |
| C1H4g22329 | 4:30,338,972-30,345,021 | + | C2H4g07191 | CX4g034095 | LOC_Os04g57870 | Os04g0675000 | - | Detail |
| C1H4g31604 | 4:30,348,162-30,351,206 | + | C2H4g18901 | CX4g031749 | LOC_Os04g57860 | Os04g0674800 | OsRHC | Detail |
| C1H4g14424 | 4:30,355,200-30,357,315 | + | C2H4g08185 | CX4g034499 | LOC_Os04g57850 | Os04g0674700 | OsBIABP1 | Detail |
| C1H4g07465 | 4:30,355,570-30,357,211 | - | - | - | - | Os04g0674750 | - | Detail |
| C1H4g25678 | 4:30,357,935-30,361,697 | + | C2H4g22750 | CX4g034412 | LOC_Os04g57840 | Os04g0674600 | - | Detail |
| C1H4g26031 | 4:30,362,395-30,362,637 | - | - | - | - | - | - | Detail |
| C1H4g20705 | 4:30,363,561-30,364,090 | - | C2H4g19163 | - | LOC_Os04g57830 | Os04g0674500 | - | Detail |
| C1H4g14562 | 4:30,371,741-30,374,112 | - | C2H4g13778 | CX4g036032 | LOC_Os04g57819 | Os04g0674450 | - | Detail |
| C1H4g16815 | 4:30,376,101-30,378,488 | - | C2H4g23666 | - | - | - | - | Detail |
| C1H4g00743 | 4:30,380,358-30,385,057 | + | C2H4g26889 | CX4g032216 | LOC_Os04g58390 | Os04g0680400 | OsALN | Detail |
| C1H4g09052 | 4:30,387,278-30,392,432 | - | C2H4g14696 | CX4g034804 | LOC_Os04g58400 | Os04g0680550 | - | Detail |
| C1H4g29689 | 4:30,394,547-30,398,942 | + | C2H4g12839 | CX4g034174 | LOC_Os04g58410 | Os04g0680700 | - | Detail |
| C1H4g13492 | 4:30,401,111-30,406,266 | + | C2H4g16137 | CX4g033109 | LOC_Os04g58420 | Os04g0680800 | - | Detail |
| C1H4g22401 | 4:30,405,619-30,406,262 | - | - | - | - | - | - | Detail |
| C1H4g24961 | 4:30,414,343-30,418,897 | - | C2H4g22610 | CX4g035083 | LOC_Os04g58470 | Os04g0681400 | - | Detail |
| C1H4g24560 | 4:30,421,291-30,423,644 | + | C2H4g22295 | CX4g034883 | LOC_Os04g58480 | Os04g0681500 | - | Detail |
| C1H4g20475 | 4:30,425,411-30,429,883 | - | C2H4g02232 | CX4g035384 | LOC_Os04g58504 | Os04g0681600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030216 | 3:30,507,731-30,508,945 | - | C1H3g18608 | C2H3g26038 | LOC_Os03g57270 | Os03g0786600 | - | Detail |
| CX3g030417 | 3:30,510,194-30,515,191 | + | C1H3g31737 | C2H3g21493 | LOC_Os03g57280 | Os03g0786700 | - | Detail |
| CX3g028623 | 3:30,516,436-30,523,151 | + | C1H3g24529 | C2H3g10038 | LOC_Os03g57290 | Os03g0786800 | OsCUL4 | Detail |
| CX3g029095 | 3:30,523,946-30,534,566 | + | C1H3g09796 | C2H3g05716 | LOC_Os03g57300 | Os03g0786900 | - | Detail |
| CX3g028386 | 3:30,538,957-30,539,943 | + | C1H3g02488 | C2H3g27192 | LOC_Os03g57310 | Os03g0787000 | OsSYP121 | Detail |
| CX3g030867 | 3:30,540,827-30,542,770 | - | C1H3g16088 | C2H3g21961 | LOC_Os03g57320 | Os03g0787100 | - | Detail |
| CX3g026667 | 3:30,544,300-30,547,251 | - | C1H3g27493 | C2H3g21062 | LOC_Os03g57330 | Os03g0787200 | - | Detail |
| CX3g028840 | 3:30,553,602-30,553,871 | + | - | - | - | - | - | Detail |
| CX3g029651 | 3:30,556,746-30,559,358 | + | C1H3g15177 | C2H3g19623 | LOC_Os03g57340 | Os03g0787300 | OsDjA5 | Detail |
| CX3g029084 | 3:30,560,003-30,560,215 | + | - | - | - | - | - | Detail |
| CX3g027522 | 3:30,566,485-30,567,569 | - | C1H3g08399 | C2H3g03483 | LOC_Os03g57360 | Os03g0813700 | - | Detail |
| CX3g028358 | 3:30,569,320-30,570,160 | - | C1H3g08399 | C2H3g03483 | LOC_Os03g57400 | Os03g0788000 | - | Detail |
| CX3g026474 | 3:30,570,561-30,570,947 | - | - | - | - | - | - | Detail |
| CX3g028483 | 3:30,573,484-30,574,035 | + | C1H3g02833 | C2H3g16218 | LOC_Os03g57410 | Os03g0788100 | - | Detail |
| CX3g026498 | 3:30,577,953-30,580,285 | + | C1H3g09747 | C2H3g07607 | LOC_Os03g57420 | Os03g0788200 | OsMl-2, OsML-2 | Detail |
| CX3g025423 | 3:30,582,039-30,586,597 | + | C1H3g04463 | C2H3g07013 | LOC_Os03g57425 | Os03g0788300 | - | Detail |
| CX3g024980 | 3:30,587,142-30,588,713 | - | C1H3g04344 | C2H3g00025 | - | Os03g0788400 | - | Detail |
| CX3g025891 | 3:30,590,927-30,593,926 | + | C1H3g20374 | C2H3g08306 | LOC_Os03g57450 | Os03g0788500 | CDPK10, OsCDPK10, OsCPK10 | Detail |
| CX3g028842 | 3:30,595,131-30,595,530 | - | - | C2H4g03445 | - | - | - | Detail |
| CX3g028954 | 3:30,596,519-30,599,516 | - | C1H3g21023 | C2H3g20845 | LOC_Os03g57460 | Os03g0788600 | - | Detail |