| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g28785 | 4:1,024,388-1,024,848 | + | C2H4g09543 | CX4g034434 | - | - | - | Detail |
| C1H4g09357 | 4:1,058,261-1,058,806 | - | - | - | - | - | - | Detail |
| C1H4g10999 | 4:1,138,864-1,141,413 | + | C2H4g26759 | CX4g035743 | LOC_Os04g02850 | Os04g0118700 | - | Detail |
| C1H4g30040 | 4:1,143,816-1,146,739 | + | C2H4g08504 | CX4g032342 | LOC_Os04g02860 | Os04g0118800 | - | Detail |
| C1H4g10566 | 4:1,149,207-1,153,087 | - | C2H4g11798 | CX4g034307 | LOC_Os04g02870 | Os04g0118900 | OsRS29 | Detail |
| C1H4g07456 | 4:1,153,995-1,155,126 | - | - | - | - | - | - | Detail |
| C1H4g26984 | 4:1,157,802-1,158,199 | + | C2H4g23600 | CX4g036463 | LOC_Os04g02880 | Os04g0119000 | - | Detail |
| C1H4g01097 | 4:1,161,480-1,165,063 | + | C2H4g06483 | CX4g034760 | LOC_Os04g02900 | Os04g0119400 | FLO19 | Detail |
| C1H4g24475 | 4:1,168,495-1,171,971 | - | C2H4g08482 | CX4g032462 | LOC_Os04g02910 | Os04g0119500 | - | Detail |
| C1H4g07943 | 4:1,178,994-1,185,441 | + | C2H4g19285 | CX4g031645 | LOC_Os04g02920 | Os04g0119800 | - | Detail |
| C1H4g25987 | 4:1,190,081-1,201,805 | + | C2H4g21106 | CX4g031516 | LOC_Os04g02970 | Os04g0120100 | - | Detail |
| C1H4g01619 | 4:1,208,599-1,210,610 | + | C2H4g08717 | CX4g032545 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C1H4g07856 | 4:1,213,250-1,217,224 | + | C2H4g29838 | CX4g032545 | LOC_Os04g02980 | Os04g0120300 | - | Detail |
| C1H4g16515 | 4:1,218,247-1,219,024 | + | C2H4g30144 | CX4g031516 | LOC_Os04g02980 | Os04g0120350 | - | Detail |
| C1H4g21533 | 4:1,238,633-1,249,050 | + | C2H4g04444 | CX4g034661 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C1H4g12053 | 4:1,251,803-1,257,155 | + | C2H4g12397 | CX4g032499 | LOC_Os04g03100 | Os04g0121300 | - | Detail |
| C1H4g15960 | 4:1,264,365-1,264,682 | + | C2H4g01070 | CX4g036276 | - | - | - | Detail |
| C1H4g21418 | 4:1,280,194-1,280,681 | + | C2H4g10665 | CX4g033795 | LOC_Os04g03164 | Os04g0121800 | - | Detail |
| C1H4g29860 | 4:1,293,976-1,295,639 | - | C2H4g05913 | CX4g034990 | LOC_Os04g03180 | Os04g0122000 | - | Detail |
| C1H4g15787 | 4:1,297,256-1,299,687 | - | C2H4g12847 | CX4g033551 | LOC_Os04g03210 | Os04g0122200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030216 | 3:30,507,731-30,508,945 | - | C1H3g18608 | C2H3g26038 | LOC_Os03g57270 | Os03g0786600 | - | Detail |
| CX3g030417 | 3:30,510,194-30,515,191 | + | C1H3g31737 | C2H3g21493 | LOC_Os03g57280 | Os03g0786700 | - | Detail |
| CX3g028623 | 3:30,516,436-30,523,151 | + | C1H3g24529 | C2H3g10038 | LOC_Os03g57290 | Os03g0786800 | OsCUL4 | Detail |
| CX3g029095 | 3:30,523,946-30,534,566 | + | C1H3g09796 | C2H3g05716 | LOC_Os03g57300 | Os03g0786900 | - | Detail |
| CX3g028386 | 3:30,538,957-30,539,943 | + | C1H3g02488 | C2H3g27192 | LOC_Os03g57310 | Os03g0787000 | OsSYP121 | Detail |
| CX3g030867 | 3:30,540,827-30,542,770 | - | C1H3g16088 | C2H3g21961 | LOC_Os03g57320 | Os03g0787100 | - | Detail |
| CX3g026667 | 3:30,544,300-30,547,251 | - | C1H3g27493 | C2H3g21062 | LOC_Os03g57330 | Os03g0787200 | - | Detail |
| CX3g028840 | 3:30,553,602-30,553,871 | + | - | - | - | - | - | Detail |
| CX3g029651 | 3:30,556,746-30,559,358 | + | C1H3g15177 | C2H3g19623 | LOC_Os03g57340 | Os03g0787300 | OsDjA5 | Detail |
| CX3g029084 | 3:30,560,003-30,560,215 | + | - | - | - | - | - | Detail |
| CX3g027522 | 3:30,566,485-30,567,569 | - | C1H3g08399 | C2H3g03483 | LOC_Os03g57360 | Os03g0813700 | - | Detail |
| CX3g028358 | 3:30,569,320-30,570,160 | - | C1H3g08399 | C2H3g03483 | LOC_Os03g57400 | Os03g0788000 | - | Detail |
| CX3g026474 | 3:30,570,561-30,570,947 | - | - | - | - | - | - | Detail |
| CX3g028483 | 3:30,573,484-30,574,035 | + | C1H3g02833 | C2H3g16218 | LOC_Os03g57410 | Os03g0788100 | - | Detail |
| CX3g026498 | 3:30,577,953-30,580,285 | + | C1H3g09747 | C2H3g07607 | LOC_Os03g57420 | Os03g0788200 | OsMl-2, OsML-2 | Detail |
| CX3g025423 | 3:30,582,039-30,586,597 | + | C1H3g04463 | C2H3g07013 | LOC_Os03g57425 | Os03g0788300 | - | Detail |
| CX3g024980 | 3:30,587,142-30,588,713 | - | C1H3g04344 | C2H3g00025 | - | Os03g0788400 | - | Detail |
| CX3g025891 | 3:30,590,927-30,593,926 | + | C1H3g20374 | C2H3g08306 | LOC_Os03g57450 | Os03g0788500 | CDPK10, OsCDPK10, OsCPK10 | Detail |
| CX3g028842 | 3:30,595,131-30,595,530 | - | - | C2H4g03445 | - | - | - | Detail |
| CX3g028954 | 3:30,596,519-30,599,516 | - | C1H3g21023 | C2H3g20845 | LOC_Os03g57460 | Os03g0788600 | - | Detail |