| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16678 | 5:15,721,422-15,723,671 | - | C1H5g18069 | CX5g039837 | LOC_Os05g32180 | Os05g0387800 | - | Detail |
| C2H5g20954 | 5:15,729,399-15,731,666 | - | C1H5g07636 | CX5g041134 | LOC_Os05g32190 | Os05g0387900 | - | Detail |
| C2H5g04124 | 5:15,732,083-15,737,360 | - | C1H5g04295 | CX5g037831 | - | Os05g0388151 | - | Detail |
| C2H5g24913 | 5:15,736,901-15,746,343 | + | C1H5g01058 | CX5g040647 | LOC_Os05g32210 | Os05g0388400 | - | Detail |
| C2H5g17569 | 5:15,750,931-15,755,041 | + | C1H5g02248 | CX5g037221 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| C2H5g24466 | 5:15,763,829-15,769,437 | + | C1H5g17467 | CX5g040484 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| C2H5g28293 | 5:15,790,576-15,794,665 | + | C1H5g20766 | CX5g040873 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| C2H5g13580 | 5:15,808,373-15,810,561 | - | C1H5g02261 | CX5g037113 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| C2H5g20984 | 5:15,811,127-15,814,108 | + | C1H5g02591 | CX5g038872 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| C2H5g00884 | 5:15,814,305-15,818,294 | - | C1H5g03931 | CX5g040346 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| C2H5g20289 | 5:15,826,747-15,831,280 | + | C1H5g28425 | CX5g041113 | LOC_Os05g32350 | Os05g0389600 | - | Detail |
| C2H5g14052 | 5:15,832,943-15,836,609 | + | C1H5g01584 | CX5g036712 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| C2H5g22345 | 5:15,836,889-15,840,359 | - | C1H5g08791 | CX5g040013 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| C2H5g07557 | 5:15,851,969-15,853,387 | - | C1H5g14444 | CX5g038787 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| C2H5g06582 | 5:15,857,217-15,866,042 | + | C1H5g04632 | CX5g037880 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| C2H5g28202 | 5:15,878,451-15,879,305 | + | C1H5g17717 | CX5g037525 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| C2H5g02167 | 5:15,887,117-15,892,132 | + | C1H5g25353 | CX5g038717 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| C2H5g22420 | 5:15,917,060-15,917,566 | - | C1H5g05718 | CX5g038007 | LOC_Os05g32460 | Os05g0390800 | - | Detail |
| C2H5g25950 | 5:15,939,008-15,943,172 | - | C1H5g07216 | CX5g039068 | LOC_Os05g32500 | Os05g0391200 | - | Detail |
| C2H5g11715 | 5:15,952,899-15,961,670 | + | C1H5g06208 | CX5g037982 | LOC_Os05g32530 | Os05g0391500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027724 | 3:30,371,615-30,371,824 | - | - | - | LOC_Os03g57030 | - | - | Detail |
| CX3g026130 | 3:30,375,050-30,376,787 | - | C1H3g16399 | C2H3g11026 | LOC_Os03g57040 | Os03g0783700 | - | Detail |
| CX3g025168 | 3:30,384,502-30,387,709 | + | C1H3g28995 | C2H3g20647 | LOC_Os03g57070 | Os03g0784000 | - | Detail |
| CX3g027646 | 3:30,393,210-30,394,810 | - | C1H3g19825 | C2H3g12289 | LOC_Os03g57080 | Os03g0784100 | - | Detail |
| CX3g031049 | 3:30,407,875-30,412,529 | + | C1H3g13683 | C2H3g11402 | LOC_Os03g57100 | Os03g0784400 | - | Detail |
| CX3g030487 | 3:30,413,835-30,417,132 | - | C1H3g10935 | C2H3g07899 | LOC_Os03g57110 | Os03g0784500 | - | Detail |
| CX3g029787 | 3:30,419,624-30,422,056 | - | C1H3g05217 | C2H3g13132 | LOC_Os03g57120 | Os03g0784700 | - | Detail |
| CX3g028010 | 3:30,423,187-30,428,677 | - | C1H3g28643 | C2H3g20434 | LOC_Os03g57130 | Os03g0784800 | - | Detail |
| CX3g030089 | 3:30,433,091-30,435,276 | - | C1H3g24334 | C2H3g13858 | LOC_Os03g57140 | Os03g0784900 | - | Detail |
| CX3g029863 | 3:30,439,833-30,440,771 | - | C1H3g27734 | C2H3g24386 | LOC_Os03g57149 | Os03g0785200 | - | Detail |
| CX3g029999 | 3:30,441,539-30,448,319 | - | C1H3g07290 | C2H3g24386 | LOC_Os03g57160 | Os03g0785300 | - | Detail |
| CX3g025222 | 3:30,448,699-30,450,677 | + | C1H3g31468 | C2H3g16096 | LOC_Os03g57170 | Os03g0785500 | - | Detail |
| CX3g030460 | 3:30,462,002-30,463,087 | + | - | C2H3g11381 | LOC_Os03g57190 | Os03g0785800 | OsPCF6, PCF6 | Detail |
| CX3g029456 | 3:30,466,961-30,467,812 | + | - | - | - | - | - | Detail |
| CX3g026845 | 3:30,472,450-30,475,666 | + | C1H3g09812 | C2H3g04828 | LOC_Os03g57210 | Os03g0786000 | - | Detail |
| CX3g026915 | 3:30,477,001-30,480,210 | + | C1H3g18801 | C2H3g03414 | LOC_Os03g57220 | Os03g0786100 | - | Detail |
| CX3g025880 | 3:30,478,925-30,479,092 | - | - | - | - | - | - | Detail |
| CX3g027465 | 3:30,487,305-30,487,454 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX3g027671 | 3:30,492,231-30,493,142 | - | C1H3g17605 | C2H3g14398 | LOC_Os03g57240 | Os03g0786400 | DST, OsDST, WL1 | Detail |
| CX3g028697 | 3:30,501,621-30,505,921 | - | C1H3g21165 | C2H3g29782 | LOC_Os03g57260 | Os03g0786500 | - | Detail |