| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g30209 | 2:8,804,939-8,808,384 | - | C1H2g23726 | CX2g022614 | LOC_Os02g17150 | Os02g0271000 | - | Detail |
| C2H2g04784 | 2:8,837,674-8,841,432 | - | C1H2g25750 | CX2g022614 | LOC_Os02g17150 | Os02g0271600 | - | Detail |
| C2H2g00807 | 2:8,854,230-8,858,432 | + | C1H2g30652 | CX2g019061 | LOC_Os02g17190 | Os02g0271900 | Os2R_MYB23 | Detail |
| C2H2g30572 | 2:8,888,406-8,892,999 | + | C1H2g30810 | CX2g022903 | LOC_Os02g17230 | Os02g0272200 | OsYUC12 | Detail |
| C2H2g19816 | 2:8,896,882-8,898,685 | + | C1H2g26000 | CX2g021864 | LOC_Os02g17240 | Os02g0272300 | OsRopGEF3 | Detail |
| C2H2g10400 | 2:8,899,032-8,904,292 | - | C1H2g16365 | CX2g021838 | LOC_Os02g17250 | Os02g0272400 | - | Detail |
| C2H2g25808 | 2:8,905,606-8,906,895 | - | - | - | LOC_Os02g18920 | - | - | Detail |
| C2H2g16498 | 2:8,907,716-8,908,806 | + | - | - | - | - | - | Detail |
| C2H2g17960 | 2:8,908,917-8,913,364 | - | - | CX12g015312 | LOC_Os03g13110 | - | - | Detail |
| C2H2g09408 | 2:8,926,183-8,932,064 | + | C1H2g26504 | CX2g021874 | LOC_Os02g17280 | Os02g0272600 | - | Detail |
| C2H2g28402 | 2:8,944,385-8,948,381 | + | C1H2g30730 | CX2g024058 | LOC_Os02g17330 | Os02g0273100 | - | Detail |
| C2H2g06272 | 2:8,978,425-8,986,700 | + | C1H2g21358 | CX2g020684 | LOC_Os02g17320 | Os02g0273000 | - | Detail |
| C2H2g20012 | 2:8,987,171-8,992,581 | + | C1H2g17426 | CX2g024571 | LOC_Os02g17304 | Os02g0272900 | Xo2 | Detail |
| C2H2g19023 | 2:9,013,242-9,014,422 | + | - | - | LOC_Os02g17292 | Os02g0272800 | - | Detail |
| C2H2g04235 | 2:9,014,500-9,015,382 | + | - | - | - | Os02g0552700 | - | Detail |
| C2H2g25389 | 2:9,035,497-9,040,913 | + | C1H2g19815 | CX2g018979 | LOC_Os02g17350 | Os02g0273700 | - | Detail |
| C2H2g13206 | 2:9,044,516-9,048,865 | - | C1H2g27079 | CX2g023608 | LOC_Os02g17360 | Os02g0273800 | - | Detail |
| C2H2g22699 | 2:9,050,705-9,052,724 | - | C1H2g07174 | CX2g022716 | LOC_Os02g17370 | Os02g0273900 | - | Detail |
| C2H2g10243 | 2:9,057,248-9,060,101 | + | C1H2g21374 | - | LOC_Os02g17380 | Os02g0274000 | RF2, Rf2 (Rfx), Rfx, Rf2 | Detail |
| C2H2g22313 | 2:9,063,041-9,071,886 | + | C1H2g00399 | CX2g024760 | LOC_Os02g17390 | Os02g0274100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025944 | 3:30,216,464-30,216,910 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g028895 | 3:30,242,405-30,242,671 | + | C1H3g08111 | C2H3g28162 | LOC_Os03g56784 | Os03g0780350 | - | Detail |
| CX3g025581 | 3:30,244,035-30,246,097 | - | C1H3g23563 | C2H3g20617 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| CX3g026219 | 3:30,248,863-30,253,402 | + | C1H3g23600 | C2H3g18001 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| CX3g030860 | 3:30,254,609-30,257,265 | + | C1H3g17595 | C2H3g14864 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| CX3g026170 | 3:30,259,644-30,261,029 | + | C1H3g26439 | C2H3g16433 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| CX3g028624 | 3:30,262,741-30,265,043 | - | C1H3g14922 | C2H3g03306 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| CX3g030035 | 3:30,266,478-30,269,758 | - | C1H3g04528 | C2H3g10423 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| CX3g028006 | 3:30,270,442-30,273,006 | + | C1H3g00697 | C2H3g00662 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| CX3g031346 | 3:30,275,155-30,275,834 | - | C1H3g00675 | C2H3g16006 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| CX3g029784 | 3:30,276,729-30,278,572 | - | C1H3g13066 | C2H3g09130 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| CX3g025012 | 3:30,281,143-30,281,649 | - | - | C2H3g00286 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| CX3g028940 | 3:30,283,652-30,284,973 | - | C1H3g04826 | C2H3g00286 | LOC_Os03g56900 | Os03g0781700 | - | Detail |
| CX3g026580 | 3:30,294,457-30,294,945 | + | - | - | LOC_Os03g56930 | Os03g0782200 | - | Detail |
| CX3g031282 | 3:30,300,392-30,300,751 | - | - | - | - | - | - | Detail |
| CX3g026212 | 3:30,305,625-30,307,365 | + | C1H3g18147 | C2H3g19846 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g026808 | 3:30,315,505-30,317,441 | - | C1H3g10536 | C2H3g26278 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| CX3g030659 | 3:30,317,806-30,322,307 | + | C1H3g29435 | C2H3g17813 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| CX3g025708 | 3:30,327,793-30,328,041 | + | - | - | - | - | - | Detail |
| CX3g025367 | 3:30,339,798-30,340,244 | - | - | - | - | - | - | Detail |